HHsearch alignment for GI: 254780942 and conserved domain: TIGR03570
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.
Probab=99.60 E-value=1.6e-15 Score=106.82 Aligned_cols=102 Identities=26% Similarity=0.376 Sum_probs=60.8
Q ss_pred CEEECCCEEEEEEEEECCCCCEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEE
Q ss_conf 10211527994112331784100122322344200021116313433212111210021344320000025864432023
Q gi|254780942|r 255 TMIAPETVFLSHDTIIQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCE 334 (442)
Q Consensus 255 ~~~~p~~~~i~~~~~I~~~~~I~~~~~Ig~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~e 334 (442)
T Consensus 88 ~lIhp~-a~i~~~~~ig~G~~I~~~~~i~~~~~IG~~~~i~~~~-----~I~Hd~~ig~~~~i~~~~~i~G~v~Ig---- 157 (201)
T TIGR03570 88 TLIHPS-AIVSPSASIGEGTVIMAGAVINPDVRIGDNVIINTGA-----IVEHDCVIGDYVHIAPGVTLSGGVVIG---- 157 (201)
T ss_pred EEECCC-CEECCCCEECCCCEEECCCEECCCCEEEEEEEECCCC-----CCCCCCEECCCCEECCCCEECCCCEEC----
T ss_conf 999998-0988986787998996286987664780267980423-----214425477876899985998988797----
Q ss_pred EECCCCCCCCCCCCCCCCCCCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECC
Q ss_conf 102112478544874555663988998997980883445775456298788798869989378
Q gi|254780942|r 335 VKKATIKEGSKINHLSYVGDSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAP 397 (442)
Q Consensus 335 i~~s~i~~g~~i~~~~~igd~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~g 397 (442)
T Consensus 158 ------------------------~~~~iG~~~~i~~-------~i~Ig~~~~Igags~V~~~ 189 (201)
T TIGR03570 158 ------------------------EGVFIGAGATIIQ-------GVTIGAGAIVGAGAVVTKD 189 (201)
T ss_pred ------------------------CCCEECCCCEECC-------CCEECCCCEECCCCEEECC
T ss_conf ------------------------7735989889889-------9899999999979889043