HHsearch alignment for GI: 254780942 and conserved domain: cd02541

>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.
Probab=100.00  E-value=0  Score=311.59  Aligned_cols=228  Identities=24%  Similarity=0.296  Sum_probs=185.7

Q ss_pred             CEEEEECCCCCCCCCCC---CCCCEEEECCEEHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC--------------
Q ss_conf             08999458877232788---8744125884857999999999779977999957988999997302--------------
Q gi|254780942|r    5 RLAIVLAAGRGHRMKSS---SSKVLQKIAGKPMISHVMETIAAAGIENVALVLGYGAEEITRINFP--------------   67 (442)
Q Consensus         5 ~~AiILAaG~GtRl~p~---~pKpLlpi~gkpli~~~i~~l~~~g~~~ivvv~~~~~e~i~~~~~~--------------   67 (442)
T Consensus         1 ~KAvILAgG~GTRL~PlT~~~PKpLlpi~gkPii~~~i~~l~~~Gi~~iii~~~~~~~~I~~~f~~~~~~~~~l~~~~k~   80 (267)
T cd02541           1 RKAVIPAAGLGTRFLPATKAIPKEMLPIVDKPVIQYIVEEAVAAGIEDIIIVTGRGKRAIEDHFDRSYELEETLEKKGKT   80 (267)
T ss_pred             CEEEEECCCCCCCCCHHHCCCCCCCCEECCEEHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHCCCH
T ss_conf             96999898774667842469984364899998699999999986998899991246666244506658899998526856


Q ss_pred             ----------CCCEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCC--CCCCCCCCCCCCCCCCCEEEE
Q ss_conf             ----------69728999859988614466410000123446058985154111533--220000001358610010010
Q gi|254780942|r   68 ----------PTLSVEYYIQDCQQGTAHAVLTAQDAIKPGYDDVIIMYGDVPLVSSH--TLKKAMDKIAQGYSIAVVGFN  135 (442)
Q Consensus        68 ----------~~~~i~~v~q~~~~GTa~Ai~~a~~~l~~~~~~~lVl~GD~~li~~~--~l~~l~~~~~~~~~~~i~~~~  135 (442)
T Consensus        81 ~~~~~~~~~~~~~~i~~~~e~~~lGtggai~~a~~~~~~--~~flv~~gD~-l~~~~~~~l~~li~~~~~~~~~~~~~~~  157 (267)
T cd02541          81 DLLEEVRIISDLANIHYVRQKEPLGLGHAVLCAKPFIGD--EPFAVLLGDD-LIDSKEPCLKQLIEAYEKTGASVIAVEE  157 (267)
T ss_pred             HHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCC--CCEEEEECCE-EEECCCHHHHHHHHHHHHHCCEEEEEEE
T ss_conf             555554224789559999778988767898721010499--8679996898-8853750668999999730872689999


Q ss_pred             C--CCCCCCCEEEECCC-----CCEECCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             1--22157440420233-----3100100146675421000355600111250146777532888740011121148999
Q gi|254780942|r  136 A--DNPKGYGRLLIKNN-----EIIAIREENDATDEERKIHYCNSGLMAIDGLYIMDWLLQIKKNKVSQEYYLTDIIEKA  208 (442)
Q Consensus       136 ~--~dp~~yGvV~~d~~-----~v~~i~Ek~d~~~~~~~~~lin~GiY~f~~~~L~~~l~~l~~~~~~gE~yltDii~~l  208 (442)
T Consensus       158 v~~~~~~~yGvv~~~~~~~~~~~i~~~~EKP~--~~~~~s~l~~~GiYi~~~~-i~~~i~~~~~~-~~~e~~l~d~i~~l  233 (267)
T cd02541         158 VPPEDVSKYGIVKGEKIDGDVFKVKGLVEKPK--PEEAPSNLAIVGRYVLTPD-IFDILENTKPG-KGGEIQLTDAIAKL  233 (267)
T ss_pred             ECCCCCCCCCEEEECCCCCCEEEEEEEEECCC--CCCCCCCEEEEEEEEECHH-HHHHHHHCCCC-CCCCCCHHHHHHHH
T ss_conf             68667873643896677870688887640688--7679853166344998899-98789728999-99833077999999


Q ss_pred             HHHHCCEEEEEECHHHEECCCCCCCCCCCCCCC
Q ss_conf             973077179991721430111210000001222
Q gi|254780942|r  209 RLDGKSIASIDVKEQEVCGCNNRYELSLIENIW  241 (442)
Q Consensus       209 ~~~g~~i~~~~~~~~~~~gv~~~~~L~~~~~~~  241 (442)
T Consensus       234 i~~~-~v~~~~~~g~-W~DiGtp~~y~~A~~~~  264 (267)
T cd02541         234 LEEE-PVYAYVFEGK-RYDCGNKLGYLKATVEF  264 (267)
T ss_pred             HHCC-CEEEEEECCE-EEECCCHHHHHHHHHHH
T ss_conf             8579-9699985988-89579989999999998