HHsearch alignment for GI: 254780942 and conserved domain: cd04184
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=96.58 E-value=0.045 Score=30.26 Aligned_cols=103 Identities=9% Similarity=0.134 Sum_probs=64.2
Q ss_pred EEEECCE--EHHHHHHHHHHHCCCC--EEEEEE--CCCH--HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCC
Q ss_conf 1258848--5799999999977997--799995--7988--999997302697289998599886144664100001234
Q gi|254780942|r 26 LQKIAGK--PMISHVMETIAAAGIE--NVALVL--GYGA--EEITRINFPPTLSVEYYIQDCQQGTAHAVLTAQDAIKPG 97 (442)
Q Consensus 26 Llpi~gk--pli~~~i~~l~~~g~~--~ivvv~--~~~~--e~i~~~~~~~~~~i~~v~q~~~~GTa~Ai~~a~~~l~~~ 97 (442)
T Consensus 6 iip~yN~~~~~l~~~l~Si~~Qt~~~~EiIvvDd~StD~~~~~~~~~~~~~~~~i~~~~~~~n~G~~~a~N~gi~~a~g- 84 (202)
T cd04184 6 VMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSALELATG- 84 (202)
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC-
T ss_conf 9974889669999999999837899879999989989478999999988518852001267887899998864513687-
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4605898515411153322000000135861001
Q gi|254780942|r 98 YDDVIIMYGDVPLVSSHTLKKAMDKIAQGYSIAV 131 (442)
Q Consensus 98 ~~~~lVl~GD~~li~~~~l~~l~~~~~~~~~~~i 131 (442)
T Consensus 85 -eyi~flD~DD-~~~p~~l~~~~~~~~~~~~~~~ 116 (202)
T cd04184 85 -EFVALLDHDD-ELAPHALYEVVKALNEHPDADL 116 (202)
T ss_pred -CEEEECCCCC-EECHHHHHHHHHHHHHCCCCCE
T ss_conf -6677327785-5284399999999986899359