HHsearch alignment for GI: 254780942 and conserved domain: cd04645
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.
Probab=99.92 E-value=1.3e-24 Score=158.47 Aligned_cols=72 Identities=31% Similarity=0.580 Sum_probs=64.7
Q ss_pred CCEECCCCEECCCEEECCCCCCCCCCCEECCCCEECCCCEEECCEEECCCCEECCCCEEC--CCCCCCCEEEECCCEEEE
Q ss_conf 639889989979808834457754562987887988699893783988998997783576--643698689813560770
Q gi|254780942|r 354 DSVVGKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGTYVASGSIIT--QDTPENSLVFARSRQIVK 431 (442)
Q Consensus 354 d~~iG~~~~ig~g~i~~n~~g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ag~~v~--~dv~~~~~v~~~~~~~~~ 431 (442)
T Consensus 60 ~~~IG~~v~Ig~~~~i--------~g~~Ig~~~~IG~~a~I~~gv~IG~~~vIgagsvV~~~~~vp~~~v~~G~PAr~ir 131 (153)
T cd04645 60 PTIIGDNVTVGHGAVL--------HGCTIGDNCLIGMGAIILDGAVIGKGSIVAAGSLVPPGKVIPPGSLVAGSPAKVVR 131 (153)
T ss_pred CCEECCCCEECCCCEE--------ECEEEEEEEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEEECCCEEEC
T ss_conf 9798999899999599--------24187300477054398569998899799449897489796998599962837971
Q ss_pred CC
Q ss_conf 77
Q gi|254780942|r 432 ED 433 (442)
Q Consensus 432 ~~ 433 (442)
T Consensus 132 ~~ 133 (153)
T cd04645 132 EL 133 (153)
T ss_pred CC
T ss_conf 59