HHsearch alignment for GI: 254780942 and conserved domain: cd04651
>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-limiting step in starch biosynthesis in plants and glycogen biosynthesis in bacteria. It is the enzymatic site for regulation of storage polysaccharide accumulation in plants and bacteria. The enzyme is a homotetramer, with each subunit containing an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain with at 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The LbH domain is involved in cooperative allosteric regulation and oligomerization.
Probab=99.08 E-value=1.2e-10 Score=79.07 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=44.2
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCEECCC
Q ss_conf 11631343321211121002134432000002586443202310211247854487455566398899899798
Q gi|254780942|r 293 QIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVGDSVVGKNVNIGAG 366 (442)
Q Consensus 293 ~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~igd~~iG~~~~ig~g 366 (442)
T Consensus 3 ~~~~~~~v~~S~Ig~Gc~I~-~~~V-~~SVIg~~~~Ig~~a~I~~svi~~~~~Ig~~~~l~~~Ii~~~~~I~~g 74 (104)
T cd04651 3 YIGRRGEVKNSLVSEGCIIS-GGTV-ENSVLFRGVRVGSGSVVEDSVIMPNVGIGRNAVIRRAIIDKNVVIPDG 74 (104)
T ss_pred EECCCCEEEECEECCCCEEE-CCEE-ECCEECCCCEECCCCEEECCEEECCCEECCCCEEEEEEECCCCEECCC
T ss_conf 88899489849988997995-9999-808972997999998996009965568999999986199999999989