HHsearch alignment for GI: 254780942 and conserved domain: cd05635
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.91 E-value=2.6e-25 Score=162.52 Aligned_cols=87 Identities=33% Similarity=0.441 Sum_probs=81.1
Q ss_pred CCCCCCEEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEECCCCE
Q ss_conf 3442000211163134332-121112100213443200000258644320231021124785448745556639889989
Q gi|254780942|r 284 CGVSIENYVQIRAFSYLEG-VHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVGDSVVGKNVN 362 (442)
Q Consensus 284 ~~~~Ig~~~~I~~~~~i~~-~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~igd~~iG~~~~ 362 (442)
T Consensus 10 GpV~I~~~~~I~~~~~i~Gp~~IG~~~~I~p~a~Ir~~t~Ig~~~~IG~--Eik~S~i~~~s~~~H~~YlGDS~iG~~vN 87 (101)
T cd05635 10 GPIYIGKDAVIEPFAVIEGPVYIGPGSRVKMGARIYGNTTIGPTCKIGG--EVEDSIIEGYSNKQHDGFLGHSYLGSWCN 87 (101)
T ss_pred CCEEECCCCEECCCCEEECCEEECCCCEECCCCEEECCCEECCCCEECC--EEEEEEEECCCCCCCCCEEEEEEECCCCE
T ss_conf 9999879999999999976669999999999978638879999977614--08761885787568775876117838757
Q ss_pred ECCCEEECCC
Q ss_conf 9798088344
Q gi|254780942|r 363 IGAGTITCNY 372 (442)
Q Consensus 363 ig~g~i~~n~ 372 (442)
T Consensus 88 iGAGT~t~Nl 97 (101)
T cd05635 88 LGAGTNNSDL 97 (101)
T ss_pred ECCCCEECCC
T ss_conf 8778578055