HHsearch alignment for GI: 254780942 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=100.00 E-value=3.4e-35 Score=218.73 Aligned_cols=139 Identities=42% Similarity=0.602 Sum_probs=120.5
Q ss_pred CEECCCCCCCCCCCCEEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 100122322344200021116313433-2121112100213443200000258644320231021124785448745556
Q gi|254780942|r 275 VIEPHVFFGCGVSIENYVQIRAFSYLE-GVHIGKKTIIGPFARIRQETTIEKNVRIGNFCEVKKATIKEGSKINHLSYVG 353 (442)
Q Consensus 275 ~I~~~~~Ig~~~~Ig~~~~I~~~~~i~-~~~Ig~~~~Ig~~~~i~~~s~i~~~~~Ig~~~ei~~s~i~~g~~i~~~~~ig 353 (442)
T Consensus 7 ~I~p~a~I~~~v~Ig~~a~I~~~a~I~~~v~IG~~~~Ig~~~~I~~~~~IG~~~~IG~~~~I~~~vi~~~~~i~~~~~ig 86 (163)
T cd05636 7 TVEEGVTIKGPVWIGEGAIVRSGAYIEGPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVKNSIIMDGTKVPHLNYVG 86 (163)
T ss_pred EECCCCEECCCEEECCCCEECCCCEEECCEEECCCCEEEECCCCCCCEEECCEEEECCCEEECCCCCCCCCCCCCCCEEC
T ss_conf 99999999898199999999999999797599899899364122698586130120551242124014784327756877
Q ss_pred CCEECCCCEECCCEEECCC--C---------------CCCCCCCEECCCCEECCCCEEECCEEECCCCEECCCCEEC
Q ss_conf 6398899899798088344--5---------------7754562987887988699893783988998997783576
Q gi|254780942|r 354 DSVVGKNVNIGAGTITCNY--D---------------GTHKYKTHINENAFIGSNSSLIAPITIGQGTYVASGSIIT 413 (442)
Q Consensus 354 d~~iG~~~~ig~g~i~~n~--~---------------g~~~~~~~ig~~~~iG~~~~i~~gv~ig~~~~i~ag~~v~ 413 (442)
T Consensus 87 ~siIG~~v~IGagtvi~n~~~~~~~~~v~~~~~~~~~~~~~~G~vIGd~~~IG~ns~I~~G~~IG~~a~IgaGsvVr 163 (163)
T cd05636 87 DSVLGENVNLGAGTITANLRFDDKPVKVRLKGERVDTGRRKLGAIIGDGVKTGINVSLNPGVKIGPGSWVYPGCVVR 163 (163)
T ss_pred CCEECCCCEECCCEEEECCCCCCCCEEEEECCEEECCCCEECCCEECCCCEECCCCEECCCEEECCCCEECCCCEEC
T ss_conf 72992996988983781776788634784077062367704077977997999898986995999998999997969