RPSBLAST alignment for GI: 254780942 and conserved domain: TIGR01852
>gnl|CDD|130911 TIGR01852, lipid_A_lpxA, acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase. This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132). Length = 254
Score = 46.9 bits (112), Expect = 9e-06
Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 63/193 (32%)
Query: 270 IQPDTVIEPHVFFGCGVSIENYVQIRAFSYLEGVHIGKKTIIGPFARIRQETTIEKN--- 326
I P +IEP G V I + + GV IG + I TTI +
Sbjct: 1 IHPTAIIEPGAEIGENVEIGPFCIVGP-----GVKIGDGVELKSHVVILGHTTIGEGTRI 55
Query: 327 ---------------------VRIGNFCEVKK-ATIKEGSK------------------- 345
+ IG+ +++ TI G+
Sbjct: 56 FPGAVIGGVPQDLKYKGERTELIIGDNNTIREFVTINRGTASGGGVTRIGNNNLLMAYSH 115
Query: 346 INHLSYVGDSVV-GKNVNIGAGTITCNYDGTHKYKTHINENAFIGSNSSLIAPITIGQGT 404
I H VG+ V+ N + AG + + + A IG ++ + IG+
Sbjct: 116 IAHDCVVGNHVILANNATL-AGHVE------------VGDYAIIGGLVAVHQFVRIGRYA 162
Query: 405 YVASGSIITQDTP 417
+ S +++D P
Sbjct: 163 MIGGLSAVSKDVP 175