HHsearch alignment for GI: 254780943 and conserved domain: COG1737

>COG1737 RpiR Transcriptional regulators [Transcription].
Probab=98.51  E-value=1.5e-05  Score=57.54  Aligned_cols=137  Identities=26%  Similarity=0.269  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC---HHHHCCCCEEEEEECCCHHHH
Q ss_conf             77446779874203614552136644999999999999742211442324314463---788079871899944801468
Q gi|254780943|r  450 YSQIEKLCCGLAKCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGP---IALITEGTFVIAIAPYDRFFQ  526 (608)
Q Consensus       450 ~~~i~~~a~~~~~~~~~~~lG~G~~y~~A~EgALKlkE~syihaeg~~agE~kHGP---~ali~~~~~vi~i~~~~~~~~  526 (608)
T Consensus       117 ~~~l~~av~~L~~A~rI~~~G~g~S~~vA~~~~~~l~~ig~-~~~~~~d~---~~~~~~~~~~~~~Dv~i~iS~sG~t~e  192 (281)
T COG1737         117 EEALERAVELLAKARRIYFFGLGSSGLVASDLAYKLMRIGL-NVVALSDT---HGQLMQLALLTPGDVVIAISFSGYTRE  192 (281)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC-CEEEECCC---HHHHHHHHHCCCCCEEEEEECCCCCHH
T ss_conf             99999999999706957999648359999999999998199-66996684---179999983899988999848999689


Q ss_pred             HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCC--HHH----HHHHHHHHHHHHHHHHHHHHC
Q ss_conf             899999999827980899956532100013466279868878--156----658999999999999999838
Q gi|254780943|r  527 KTLSNIQEIVTRGGRVIFITDEEGLKRQDFPSIETIVLPSMG--EIV----SPIVFSLPIQMIAYCTAVLIG  592 (608)
Q Consensus       527 k~~s~~~Ei~arg~~vi~I~~~~~~~~~~~~~~~~i~iP~~~--~~l----~pl~~~iplQllAy~~A~~~G  592 (608)
T Consensus       193 -~i~~a~~ak~~ga~vIaiT~~~~spla~~Ad-~~L~~~~~~~~~~~~~~~s~~a~l~l~d~L~~~~~~~~~  262 (281)
T COG1737         193 -IVEAAELAKERGAKVIAITDSADSPLAKLAD-IVLLVPVAEESFFRSPISSRIAQLALIDALITAVAQRRG  262 (281)
T ss_pred             -HHHHHHHHHHCCCEEEEEECCCCCCHHHHCC-EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             -9999999997799299983999993666547-788712676322255607889999999999999998746