HHsearch alignment for GI: 254780943 and conserved domain: KOG0399
>KOG0399 consensus.
Probab=97.97 E-value=0.00057 Score=46.64 Aligned_cols=213 Identities=19% Similarity=0.305 Sum_probs=128.3
Q ss_pred CCEEEEEECCCCHHHHHHH---HCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEECCEEC------CHHHHHH
Q ss_conf 8929999458658998875---210347865446510454388997002675023889999768150------6899989
Q gi|254780943|r 39 DGKIQCVRAQGKLSELEKE---LNKKPLKGNIGIAHTRWATHGLPNKENSHPHCIEGIAVTHNGIIE------NFSRLKK 109 (608)
Q Consensus 39 ~~~i~~~K~~g~i~~l~~~---~~~~~~~~~~gIgHtR~AT~G~~~~~NahP~~~~~~~vvHNG~I~------N~~elr~ 109 (608)
T Consensus 255 sn~TIVYKGql~~~ql~~yY~DL~N~~y~S~~AlvHsRFSTNTfPsWdrAQPmR----~l~HNGEINTlrGN~NwMraRE 330 (2142)
T KOG0399 255 SNQTIVYKGQLRPEQLYNYYPDLTNAEYKSHFALVHSRFSTNTFPSWDRAQPMR----FLAHNGEINTLRGNKNWMRARE 330 (2142)
T ss_pred CCCEEEEECCCCHHHHHHHCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCH----HHHCCCCEEEECCCHHHHHHHH
T ss_conf 575489804337899865241006554336010254201368898863105320----1221673111025166788777
Q ss_pred HHHHCC-----------CEEEECCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHH-----------HHHHH--HHH-----
Q ss_conf 999789-----------88972476156788876343200-1026779999998-----------87512--220-----
Q gi|254780943|r 110 EHFSSQ-----------QVFLTETDTEVIACLLEKFIKNG-SSKKETMQKLMQC-----------LTGSY--SIA----- 159 (608)
Q Consensus 110 ~l~~~g-----------~~f~s~tDsEvi~~li~~~~~~~-~~~~~ai~~~~~~-----------l~G~y--a~~----- 159 (608)
T Consensus 331 g~mks~~~~~e~~kl~Pive~~~SDSa~lDnv~ElLvrsG~rslpEAvM~mVPEA~~nd~~~~~e~k~fYd~~a~~MEpW 410 (2142)
T KOG0399 331 GVMKSAVFKDELNKLLPIVEEGGSDSAALDNVLELLVRSGGRSLPEAVMMMVPEAWQNDKNMDPEKKAFYDWAACQMEPW 410 (2142)
T ss_pred HHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 76514201014563122346788731346679999998079782798987476977069987878889999986027888
Q ss_pred -----HHCCCCCCEEEEE---ECC-CC-EEEECCCCCEEEECCCCCCCCCCCEEE---ECCCCEEEEEECCCCEECCCCC
Q ss_conf -----1004687238999---749-96-077608961366137620111110379---8276518897305741003332
Q gi|254780943|r 160 -----VIFEDDPHSIIVA---RKG-PP-LIIGHGEGEMFVGSDVTALTLLTDKVT---YMEDGDWAIIRNSGLTIYDSQG 226 (608)
Q Consensus 160 -----il~~~~p~~i~~a---r~g-sP-L~iG~~~~~~~vaSd~~al~~~t~~~~---~L~dgei~~i~~~~~~i~~~~~ 226 (608)
T Consensus 411 DGPALl~FsD--Gry~GA~LDRNGLRP~Ryy~Tsdd~v~~ASEVGvv~i~~~kVv~KgRL~PG~MllVD~~~g~v~dd~e 488 (2142)
T KOG0399 411 DGPALLTFSD--GRYCGAILDRNGLRPARYYITSDDRVICASEVGVVPIPPEKVVQKGRLKPGMMLLVDTELGQVVDDKE 488 (2142)
T ss_pred CCCEEEEECC--CCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCEEEEEECCCCEEEECHH
T ss_conf 8866898517--85454341357886403698319879995204555798799643167688718999843785876588
Q ss_pred CCCCCHHHHHCCCCCHHCCCHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 221000110001210000140789999997417899999871
Q gi|254780943|r 227 YEIERPIQIVQIAPFLIGKGNYRHFMEKEIYEQPEAISRVLS 268 (608)
Q Consensus 227 ~~~~~~~~~i~~~~~~~~kg~y~hfm~kEI~EQP~~l~~~i~ 268 (608)
T Consensus 489 lK--~---r------is~~~py~~wl~~~~~~l~~~~~~~~~ 519 (2142)
T KOG0399 489 LK--K---R------ISSRRPYGSWLSENIILLKPIKDSVLS 519 (2142)
T ss_pred HH--H---H------HHHCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88--7---7------762186778888765530034443110