HHsearch alignment for GI: 254780943 and conserved domain: PRK05441
>PRK05441 murQ N-acetylmuramic acid-6-phosphate etherase; Reviewed.
Probab=99.43 E-value=1.7e-12 Score=106.00 Aligned_cols=139 Identities=24% Similarity=0.224 Sum_probs=100.7
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHH-H-------HHHH----CCC----CCEEEECC---HHHC---CCCCCCCCCEEEE
Q ss_conf 2356551035203654307999999-9-------9862----566----73143042---0100---1233445550577
Q gi|254780943|r 286 DFANISGLLVSSCGTSYLAGLVGKF-W-------FERL----ARL----KVEIDVSS---EFRY---RDFVYSSKWASLF 343 (608)
Q Consensus 286 ~~~~~~~I~~vGcGTSy~Aal~~~~-~-------~e~~----~~i----~v~v~~as---Ef~y---~~~~~~~~tlvI~ 343 (608)
T Consensus 54 ~l~~gGRL~YvGAGTSGRlgvlDa~E~~PTFg~~~~~v~~liAGG~~Al~~~~EgaED~~~~g~~dl~~~~~~~~DvvIg 133 (273)
T PRK05441 54 ALRSGGRLIYIGAGTSGRLGVLDASECPPTFGVPPELVVGLIAGGEKALTKAVEGAEDDAELGAADLKAINLTAKDVVVG 133 (273)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHEEEEECCHHHHHHCHHCCCCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf 99759829997476158899988986487668998991446768899986361102468889999999828996578999
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 52678818999999998630244246511787631000241013674200110007--8889999999999999776212
Q gi|254780943|r 344 ISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVAST--KAFTCQLLVLVIMAIYAGKVRG 421 (608)
Q Consensus 344 iSQSGeT~dti~Al~~ak~~g~~tiaItN~~~S~la~~aD~~i~~~aG~Ei~VasT--Ksftaql~~l~llal~l~~~~g 421 (608)
T Consensus 134 IaASG~TPyv~~al~~A~~~ga~ti~I~~n~~s~l~~~ad~~I~~~tGpEvitGSTRmKAGTAqK~iLNmiST~~mi~lG 213 (273)
T PRK05441 134 IAASGRTPYVIGALEYAREIGALTIAISCNPGSPISKEADIAIEVVVGPEVLTGSTRMKAGTAQKLVLNMISTGVMIKLG 213 (273)
T ss_pred EECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 93688971899999999986995799853896200010681375178843002666545225999999999899999808
Q ss_pred CHH
Q ss_conf 001
Q gi|254780943|r 422 YIN 424 (608)
Q Consensus 422 ~i~ 424 (608)
T Consensus 214 kVy 216 (273)
T PRK05441 214 KVY 216 (273)
T ss_pred CCC
T ss_conf 612