HHsearch alignment for GI: 254780943 and conserved domain: PRK10886
>PRK10886 DnaA initiator-associating protein DiaA; Provisional.
Probab=98.18 E-value=1.6e-05 Score=57.37 Aligned_cols=102 Identities=18% Similarity=0.125 Sum_probs=70.1
Q ss_pred CCCCCCCEEEEECCCCCCHHH-HHHHHHHHHC----CCCCEEE---------ECCHHHCCC-------CCCCCCCEEEEE
Q ss_conf 235655103520365430799-9999998625----6673143---------042010012-------334455505775
Q gi|254780943|r 286 DFANISGLLVSSCGTSYLAGL-VGKFWFERLA----RLKVEID---------VSSEFRYRD-------FVYSSKWASLFI 344 (608)
Q Consensus 286 ~~~~~~~I~~vGcGTSy~Aal-~~~~~~e~~~----~i~v~v~---------~asEf~y~~-------~~~~~~tlvI~i 344 (608)
T Consensus 37 ~l~~g~ki~~cGNGGSaa~A~Hfa~el~~~f~~~R~~lpai~L~~d~s~lTai~ND~~~~~vF~rQl~alg~~gDiLi~i 116 (196)
T PRK10886 37 SLLNGNKILCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQVRALGHAGDVLLAI 116 (196)
T ss_pred HHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 99879979998684748899999999964655689884056632670565431166779999999999856799989999
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC---CCCCCC
Q ss_conf 2678818999999998630244246511787631000---241013
Q gi|254780943|r 345 SQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARE---SDFIFP 387 (608)
Q Consensus 345 SQSGeT~dti~Al~~ak~~g~~tiaItN~~~S~la~~---aD~~i~ 387 (608)
T Consensus 117 StSGnS~Nii~Ai~~A~~~g~~~i~ltG~~gg~l~~l~~~~Di~I~ 162 (196)
T PRK10886 117 STRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIR 162 (196)
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEE
T ss_conf 4899998999999999988998999976886236651576798998