HHsearch alignment for GI: 254780943 and conserved domain: PRK11302

>PRK11302 DNA-binding transcriptional regulator HexR; Provisional.
Probab=98.30  E-value=8e-05  Score=52.56  Aligned_cols=112  Identities=18%  Similarity=0.139  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHCCCCEEEEEECCCHHHHHHH
Q ss_conf             77446779874203614552136644999999999999742211442324314463788079871899944801468899
Q gi|254780943|r  450 YSQIEKLCCGLAKCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTL  529 (608)
Q Consensus       450 ~~~i~~~a~~~~~~~~~~~lG~G~~y~~A~EgALKlkE~syihaeg~~agE~kHGP~ali~~~~~vi~i~~~~~~~~k~~  529 (608)
T Consensus       115 ~~~l~~av~li~~A~~I~i~G~G~S~~vA~~~~~kl~r~g-~~~~~~~d~~~~~~~a~~~~~~Dvvi~iS~sG~t~e-~i  192 (284)
T PRK11302        115 PSAINRAVDLLTQAKKISFFGLGASAAVAHDAQNKFFRFN-VPVVYFDDIVMQRMSCMNSSDGDVVVLISHTGRTKS-LV  192 (284)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC-CCEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCHH-HH
T ss_conf             9999999999971895899964850999999999998439-814642878999999971999888999737999879-99


Q ss_pred             HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECC
Q ss_conf             999999827980899956532100013466279868
Q gi|254780943|r  530 SNIQEIVTRGGRVIFITDEEGLKRQDFPSIETIVLP  565 (608)
Q Consensus       530 s~~~Ei~arg~~vi~I~~~~~~~~~~~~~~~~i~iP  565 (608)
T Consensus       193 ~~~~~Ak~~ga~vIaIT~~-~SpLa~~A-D~~L~~~  226 (284)
T PRK11302        193 ELAQLARENGATVIGITAA-GSPLAREA-TLALTLD  226 (284)
T ss_pred             HHHHHHHHCCCCEEEECCC-CCHHHHHC-CEEEEEC
T ss_conf             9999999879958997799-98148868-9889846