HHsearch alignment for GI: 254780943 and conserved domain: PRK13937

Probab=98.46  E-value=1e-06  Score=65.78  Aligned_cols=104  Identities=19%  Similarity=0.201  Sum_probs=72.8

Q ss_pred             CCCCCCCEEEEECCCCCCHHH-HHHHHHHHHC----CCCCEEE---------ECCHHHC-------CCCCCCCCCEEEEE
Q ss_conf             235655103520365430799-9999998625----6673143---------0420100-------12334455505775
Q gi|254780943|r  286 DFANISGLLVSSCGTSYLAGL-VGKFWFERLA----RLKVEID---------VSSEFRY-------RDFVYSSKWASLFI  344 (608)
Q Consensus       286 ~~~~~~~I~~vGcGTSy~Aal-~~~~~~e~~~----~i~v~v~---------~asEf~y-------~~~~~~~~tlvI~i  344 (608)
T Consensus        38 ~~~~g~kI~~~GNGGSaa~A~Hfa~dl~~~~~~~r~~lpaisL~~d~~~lTA~~ND~g~~~if~~ql~~~~~~gDili~i  117 (192)
T PRK13937         38 ALASGGKLLLCGNGGSAADAQHIAAELVGRYKKERPALPAIALTTDTSALTAIGNDYGYERVFARQVEALGRPGDVLIGI  117 (192)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             99879989999686318889999999964135578985357767882877764277878999999999557889889997


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             267881899999999863024424651178763100024101367
Q gi|254780943|r  345 SQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIK  389 (608)
Q Consensus       345 SQSGeT~dti~Al~~ak~~g~~tiaItN~~~S~la~~aD~~i~~~  389 (608)
T Consensus       118 S~SGnS~Nii~A~~~A~~~g~~~i~ltG~~gg~l~~~~D~~i~vp  162 (192)
T PRK13937        118 STSGNSPNVLAALEKARELGMTTIGLTGRDGGKMKELCDLLLIVP  162 (192)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCEEEEEC
T ss_conf             799999799999999998799799998889605788399899958