HHsearch alignment for GI: 254780943 and conserved domain: PTZ00254

>PTZ00254 40S ribosomal protein SA; Provisional.
Probab=94.42  E-value=0.38  Score=27.01  Aligned_cols=123  Identities=10%  Similarity=0.081  Sum_probs=69.1

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC--EEEECCHHHC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf             565510352036543079999999986256673--1430420100-1233445550577526788189999999986302
Q gi|254780943|r  288 ANISGLLVSSCGTSYLAGLVGKFWFERLARLKV--EIDVSSEFRY-RDFVYSSKWASLFISQSGETADTLASLRYMRTQG  364 (608)
Q Consensus       288 ~~~~~I~~vGcGTSy~Aal~~~~~~e~~~~i~v--~v~~asEf~y-~~~~~~~~tlvI~iSQSGeT~dti~Al~~ak~~g  364 (608)
T Consensus        69 ~~~~~Il~V~tr~--~~q~aV~kfA-~~tG~~~i~~Rw~pGtlTN~i~~~f~eP~lliV~DP~~d~----~AV~EA~~~n  141 (242)
T PTZ00254         69 ENPADVVVVSSRP--YGQRAILKFS-QYTGASFIAGRFTPGTFTNQIQKKFQEPRLLIVTDPRTDH----QAIREASYVN  141 (242)
T ss_pred             CCCCCEEEEECCH--HHHHHHHHHH-HHHCCCEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCH----HHHHHHHHCC
T ss_conf             4799779998388--9879999999-9979942405127866468766524688889996675440----8999999859


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             4424651178763100024101367420011000788899999999999997762120015776
Q gi|254780943|r  365 LTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIMAIYAGKVRGYINEEQE  428 (608)
Q Consensus       365 ~~tiaItN~~~S~la~~aD~~i~~~aG~Ei~VasTKsftaql~~l~llal~l~~~~g~i~~~~~  428 (608)
T Consensus       142 IPvIal~DTds-~p-~~VD~~IP~Nd---------ds~~SI~Li~~lLArevl~~rG~i~r~~~  194 (242)
T PTZ00254        142 IPVIALCDTDA-PL-EYVDIAIPCNN---------RGKKSIAMMYWLLAREVLRLRGTIPRSEP  194 (242)
T ss_pred             CCEEEEECCCC-CC-CCCCEEEECCC---------CCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             98898616999-95-32656765688---------30768999999999999983688788898