HHsearch alignment for GI: 254780943 and conserved domain: cd05005
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=99.59 E-value=2.4e-14 Score=118.78 Aligned_cols=133 Identities=23% Similarity=0.235 Sum_probs=93.2
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHC--CCCCEEEECCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 356551035203654307999999998625--667314304201001233445550577526788189999999986302
Q gi|254780943|r 287 FANISGLLVSSCGTSYLAGLVGKFWFERLA--RLKVEIDVSSEFRYRDFVYSSKWASLFISQSGETADTLASLRYMRTQG 364 (608)
Q Consensus 287 ~~~~~~I~~vGcGTSy~Aal~~~~~~e~~~--~i~v~v~~asEf~y~~~~~~~~tlvI~iSQSGeT~dti~Al~~ak~~g 364 (608)
T Consensus 30 I~~a~~I~~~G~G~Sg---~va~~~a~rl~~lG~~~~~--~~d~~--~~~i~~~Dv~I~iS~SG~T~~~~~~~~~aK~~g 102 (179)
T cd05005 30 ILNAKRIFVYGAGRSG---LVAKAFAMRLMHLGLNVYV--VGETT--TPAIGPGDLLIAISGSGETSSVVNAAEKAKKAG 102 (179)
T ss_pred HHCCCCEEEEEECCHH---HHHHHHHHHHHHCCCCEEE--ECCCC--CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 9749948999856258---7799999999735980124--35655--577999999999819999568999999999879
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCCCC----CCCCHHH----HHH-HHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 44246511787631000241013674200----1100078----889-999999999999776212001577
Q gi|254780943|r 365 LTIGSLVNVLESTIARESDFIFPIKAGPE----IGVASTK----AFT-CQLLVLVIMAIYAGKVRGYINEEQ 427 (608)
Q Consensus 365 ~~tiaItN~~~S~la~~aD~~i~~~aG~E----i~VasTK----sft-aql~~l~llal~l~~~~g~i~~~~ 427 (608)
T Consensus 103 a~iI~IT~~~~S~la~~aD~~l~ip~~~~~~~~~~~~s~~pm~s~~e~~~l~~~Dal~~~lm~~~~-~~~~~ 173 (179)
T cd05005 103 AKVVLITSNPDSPLAKLADVVVVIPAATKDDHGGEHKSIQPLGTLFEQSALVFLDAVIAKLMEELG-VSEEE 173 (179)
T ss_pred CEEEEEECCCCCHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCHHH
T ss_conf 919999798999789958999981874313888898765757759999999999999999999809-89999