HHsearch alignment for GI: 254780943 and conserved domain: cd05005
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=98.47 E-value=1.6e-05 Score=57.40 Aligned_cols=140 Identities=16% Similarity=0.269 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHCCCCEEEEEECCCHHHHHHH
Q ss_conf 77446779874203614552136644999999999999742211442324314463788079871899944801468899
Q gi|254780943|r 450 YSQIEKLCCGLAKCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTL 529 (608)
Q Consensus 450 ~~~i~~~a~~~~~~~~~~~lG~G~~y~~A~EgALKlkE~syihaeg~~agE~kHGP~ali~~~~~vi~i~~~~~~~~k~~ 529 (608)
T Consensus 20 ~~~i~~~~~~I~~a~~I~~~G~G~Sg~va~~~a~rl~~lG~---~~~~~~d~~~~~---i~~~Dv~I~iS~SG~T~~-~~ 92 (179)
T cd05005 20 EEELDKLISAILNAKRIFVYGAGRSGLVAKAFAMRLMHLGL---NVYVVGETTTPA---IGPGDLLIAISGSGETSS-VV 92 (179)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCC---CEEEECCCCCCC---CCCCCEEEEECCCCCCHH-HH
T ss_conf 99999999999749948999856258779999999973598---012435655577---999999999819999568-99
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCC--------CHHHHH------HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999982798089995653210001346627986887--------815665------8999999999999999838779
Q gi|254780943|r 530 SNIQEIVTRGGRVIFITDEEGLKRQDFPSIETIVLPSM--------GEIVSP------IVFSLPIQMIAYCTAVLIGTDV 595 (608)
Q Consensus 530 s~~~Ei~arg~~vi~I~~~~~~~~~~~~~~~~i~iP~~--------~~~l~p------l~~~iplQllAy~~A~~~G~dp 595 (608)
T Consensus 93 ~~~~~aK~~ga~iI~IT~~~~S~la~~aD-~~l~ip~~~~~~~~~~~~s~~pm~s~~e~~~l~~~Dal~~~lm~~~~~~~ 171 (179)
T cd05005 93 NAAEKAKKAGAKVVLITSNPDSPLAKLAD-VVVVIPAATKDDHGGEHKSIQPLGTLFEQSALVFLDAVIAKLMEELGVSE 171 (179)
T ss_pred HHHHHHHHCCCEEEEEECCCCCHHHHHCC-EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 99999998799199997989997899589-99981874313888898765757759999999999999999999809899
Q ss_pred CC
Q ss_conf 88
Q gi|254780943|r 596 DQ 597 (608)
Q Consensus 596 D~ 597 (608)
T Consensus 172 ~~ 173 (179)
T cd05005 172 EE 173 (179)
T ss_pred HH
T ss_conf 99