HHsearch alignment for GI: 254780943 and conserved domain: cd05009

>cd05009 SIS_GlmS_GlmD_2 SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=98.42  E-value=2.4e-06  Score=63.19  Aligned_cols=129  Identities=14%  Similarity=0.226  Sum_probs=94.1

Q ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCHHHCCCC-CCCCCCEEEEECCCCCCHHHHH-HHHHHHHCC
Q ss_conf             35655103520365430799999999862566731430420100123-3445550577526788189999-999986302
Q gi|254780943|r  287 FANISGLLVSSCGTSYLAGLVGKFWFERLARLKVEIDVSSEFRYRDF-VYSSKWASLFISQSGETADTLA-SLRYMRTQG  364 (608)
Q Consensus       287 ~~~~~~I~~vGcGTSy~Aal~~~~~~e~~~~i~v~v~~asEf~y~~~-~~~~~tlvI~iSQSGeT~dti~-Al~~ak~~g  364 (608)
T Consensus        10 ~~~~~~~~~lG~G~~~g~A~E~aLKl~E~~~~~a~~~~~~Ef~HGP~~~i~~~~~vi~l~~~~~~~~~~~~~~~~~~~~~   89 (153)
T cd05009          10 LKEAKSFYVLGRGPNYGTALEGALKLKETSYIHAEAYSAGEFKHGPIALVDEGTPVIFLAPEDRLEEKLESLIKEVKARG   89 (153)
T ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCC
T ss_conf             84788089994897889999999999999899832676888713739986689867998144378888999999999659


Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             4424651178763100024101367420011000788899999999999997762120
Q gi|254780943|r  365 LTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIMAIYAGKVRGY  422 (608)
Q Consensus       365 ~~tiaItN~~~S~la~~aD~~i~~~aG~Ei~VasTKsftaql~~l~llal~l~~~~g~  422 (608)
T Consensus        90 ~~v~~i~~~~~~--~~~~~~~~~~p~~~~-----~~~~~~~~i~~Q~la~~~a~~~G~  140 (153)
T cd05009          90 AKVIVITDDGDA--KDLADVVIRVPATVE-----ELSPLLYIVPLQLLAYHLAVARGI  140 (153)
T ss_pred             CEEEEEECCCCC--CCCCCEEEECCCCCH-----HHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             849999778643--455761687899727-----889999999999999999998097