RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddB
21,608 sequences; 5,994,473 total letters
Searching..................................................done
Query= gi|254780943|ref|YP_003065356.1|
glucosamine--fructose-6-phosphate aminotransferase [Candidatus
Liberibacter asiaticus str. psy62]
(608 letters)
>gnl|CDD|178980 PRK00331, PRK00331, glucosamine--fructose-6-phosphate
aminotransferase; Reviewed.
Length = 604
Score = 905 bits (2342), Expect = 0.0
Identities = 307/610 (50%), Positives = 412/610 (67%), Gaps = 8/610 (1%)
Query: 1 MCGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
MCGIVG VG+ + E L + LKRLEYRGYDS+G+A + DG ++ +A GK++ LE +L +
Sbjct: 1 MCGIVGYVGQRNAAEILLEGLKRLEYRGYDSAGIAVLDDGGLEVRKAVGKVANLEAKLEE 60
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHPH--CIEGIAVTHNGIIENFSRLKKEHFSSQQVF 118
+PL G GI HTRWATHG P + N+HPH C IAV HNGIIEN++ LK+E + VF
Sbjct: 61 EPLPGTTGIGHTRWATHGKPTERNAHPHTDCSGRIAVVHNGIIENYAELKEELLAKGHVF 120
Query: 119 LTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGPPL 178
+ETDTEVIA L+E+ +K G E ++K ++ L G+Y++AVI +D+P +I+ AR G PL
Sbjct: 121 KSETDTEVIAHLIEEELKEGGDLLEAVRKALKRLEGAYALAVIDKDEPDTIVAARNGSPL 180
Query: 179 IIGHGEGEMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIYDSQGYEIERPIQIVQI 238
+IG GEGE F+ SD AL T +V Y+EDG+ A++ G+ I+D G +ER + V
Sbjct: 181 VIGLGEGENFLASDALALLPYTRRVIYLEDGEIAVLTRDGVEIFDFDGNPVEREVYTVDW 240
Query: 239 APFLIGKGNYRHFMEKEIYEQPEAISRVLSHYINLSDHTIIPNIFNYDFANISGLLVSSC 298
KG YRHFM KEIYEQPEAI L ++ + + D I + + +C
Sbjct: 241 DASAAEKGGYRHFMLKEIYEQPEAIRDTLEGRLDELGEGELADE---DLKKIDRIYIVAC 297
Query: 299 GTSYLAGLVGKFWFERLARLKVEIDVSSEFRYRDFVYSSKWASLFISQSGETADTLASLR 358
GTSY AGLV K+ E LA + VE++++SEFRYRD V S K + ISQSGETADTLA+LR
Sbjct: 298 GTSYHAGLVAKYLIESLAGIPVEVEIASEFRYRDPVLSPKTLVIAISQSGETADTLAALR 357
Query: 359 YMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIMAIYAGK 418
+ G ++ NV STIARESD + AGPEIGVASTKAFT QL VL ++A+ K
Sbjct: 358 LAKELGAKTLAICNVPGSTIARESDAVLYTHAGPEIGVASTKAFTAQLAVLYLLALALAK 417
Query: 419 VRGYINEEQERELIRSLVEIPRKMFDVLQNIYSQIEKLCCGLAKCQTLLYVGRGSSYPLA 478
RG ++ E+E +L+ L E+P + VL ++ QIE+L A + L++GRG YP+A
Sbjct: 418 ARGTLSAEEEADLVHELRELPALIEQVL-DLKEQIEELAEDFADARNALFLGRGVDYPVA 476
Query: 479 LEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTLSNIQEIVTR 538
LEGALK+KEISY+HAEGYAAGELKHGPIALI EG V+AIAP D ++KT SNIQE+ R
Sbjct: 477 LEGALKLKEISYIHAEGYAAGELKHGPIALIDEGMPVVAIAPNDELYEKTKSNIQEVKAR 536
Query: 539 GGRVIFITDEEGLKRQDFPSIETIVLPSMGEIVSPIVFSLPIQMIAYCTAVLIGTDVDQP 598
G RVI I DE ++ + I +P + E+++P+++ +P+Q++AY A+ GTDVD+P
Sbjct: 537 GARVIVIADEGDEVAEEA--DDVIEVPEVHELLAPLLYVVPLQLLAYHVALARGTDVDKP 594
Query: 599 RNLAKSVTVE 608
RNLAKSVTVE
Sbjct: 595 RNLAKSVTVE 604
>gnl|CDD|130205 TIGR01135, glmS, glucosamine--fructose-6-phosphate aminotransferase
(isomerizing). The member from Methanococcus jannaschii
contains an intein.
Length = 607
Score = 760 bits (1964), Expect = 0.0
Identities = 297/609 (48%), Positives = 405/609 (66%), Gaps = 4/609 (0%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKK 61
CGIVG +G+ L + LKRLEYRGYDS+G+A + +GK+ +A GK+ EL +L +K
Sbjct: 1 CGIVGYIGQRDAVPILLEGLKRLEYRGYDSAGIAVVDEGKLFVRKAVGKVQELANKLGEK 60
Query: 62 PLKGNIGIAHTRWATHGLPNKENSHPHCIEG--IAVTHNGIIENFSRLKKEHFSSQQVFL 119
PL G +GI HTRWATHG P +EN+HPH EG IAV HNGIIEN++ L++E + VF+
Sbjct: 61 PLPGGVGIGHTRWATHGKPTEENAHPHTDEGGRIAVVHNGIIENYAELREELEARGHVFV 120
Query: 120 TETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGPPLI 179
++TDTEVIA L+E++++ G E +QK ++ L G+Y++AV+ D P +++ AR G PLI
Sbjct: 121 SDTDTEVIAHLIEEYLREGGDLLEAVQKALKQLRGAYALAVLHADHPETLVAARSGSPLI 180
Query: 180 IGHGEGEMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIYDSQGYEIERPIQIVQIA 239
+G G+GE FV SDVTAL +T +V Y+EDGD AI+ G+ IY+ +G + R ++ +
Sbjct: 181 VGLGDGENFVASDVTALLPVTRRVIYLEDGDIAILTRDGVRIYNFEGAPVSREVRTIDWD 240
Query: 240 PFLIGKGNYRHFMEKEIYEQPEAISRVLSHYINLSDHTIIPNIFNYDFANISGLLVSSCG 299
KG YRHFM KEIYEQP A+ L I+ + + N+ + + +CG
Sbjct: 241 LDAAEKGGYRHFMLKEIYEQPRALRDTLEGRISEAGVVLEELGAEELLKNVDRIQIVACG 300
Query: 300 TSYLAGLVGKFWFERLARLKVEIDVSSEFRYRDFVYSSKWASLFISQSGETADTLASLRY 359
TSY AGLV K+ ERLA + VE++++SEFRYR V + ISQSGETADTLA+LR
Sbjct: 301 TSYHAGLVAKYLIERLAGIPVEVEIASEFRYRKPVVDKDTLVIAISQSGETADTLAALRL 360
Query: 360 MRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIMAIYAGKV 419
+ G + NV ST+ RESD +AGPEIGVASTKAFT QL VL ++A+ K
Sbjct: 361 AKELGAKTLGICNVPGSTLVRESDHTLYTRAGPEIGVASTKAFTTQLTVLYLLALKLAKA 420
Query: 420 RGYINEEQERELIRSLVEIPRKMFDVLQNIYSQIEKLCCGLAKCQTLLYVGRGSSYPLAL 479
RG ++ E+E EL+ L +P + VL + I +L A L++GRG YP+AL
Sbjct: 421 RGTLSAEEEAELVDGLRRLPALVEQVL-KLEESIAELAERYADKHNFLFLGRGLGYPIAL 479
Query: 480 EGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTLSNIQEIVTRG 539
EGALK+KEISY+HAEGY AGELKHGPIALI EG V+AIAP D F+KT SN++E+ RG
Sbjct: 480 EGALKLKEISYIHAEGYPAGELKHGPIALIDEGLPVVAIAPKDSLFEKTKSNVEEVKARG 539
Query: 540 GRVIFITDEEGLKRQDFPSIETIVLPSMGEIVSPIVFSLPIQMIAYCTAVLIGTDVDQPR 599
RVI D E + + + + I LP + E+++PIV+++P+Q++AY A+ GTDVD+PR
Sbjct: 540 ARVIVFAD-EDDEFLESVADDVIKLPEVEELLAPIVYTVPLQLLAYHIALAKGTDVDKPR 598
Query: 600 NLAKSVTVE 608
NLAKSVTVE
Sbjct: 599 NLAKSVTVE 607
>gnl|CDD|185544 PTZ00295, PTZ00295, glucosamine-fructose-6-phosphate
aminotransferase; Provisional.
Length = 640
Score = 452 bits (1164), Expect = e-127
Identities = 220/625 (35%), Positives = 348/625 (55%), Gaps = 27/625 (4%)
Query: 1 MCGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGK----IQCVRAQGK---LSE 53
CGIVG +G E + L + ++ L+ RGYDS G++TI G + +
Sbjct: 24 CCGIVGYLGNEDASKILLEGIEILQNRGYDSCGISTISSGGELKTTKYASDGTTSDSIEI 83
Query: 54 LEKELNKKPLKGNIGIAHTRWATHGLPNKENSHPHC--IEGIAVTHNGIIENFSRLKKEH 111
L+++L IGIAHTRWATHG EN+HPHC + IA+ HNG IEN+ LK E
Sbjct: 84 LKEKLLDSHKNSTIGIAHTRWATHGGKTDENAHPHCDYKKRIALVHNGTIENYVELKSEL 143
Query: 112 FSSQQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIV 171
+ F +ETD+EVIA L+ + G +E ++ + L G++ + +I +D+P S+IV
Sbjct: 144 IAKGIKFRSETDSEVIANLIGLELDQGEDFQEAVKSAISRLQGTWGLCIIHKDNPDSLIV 203
Query: 172 ARKGPPLIIGHGEGEMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIYDSQGYEIER 231
AR G PL++G G+ ++V S+ +A T++ ++DG+ A + + +Q +
Sbjct: 204 ARNGSPLLVGIGDDSIYVASEPSAFAKYTNEYISLKDGEIAELSLENVNDLYTQRRVEKI 263
Query: 232 PIQIVQIAPFLIGKGNYRHFMEKEIYEQPEAISRVLSH---YINLSDHTIIPNIFNY--D 286
P ++++ +P Y H+ KEI+EQP A+SR L++ ++ + + Y +
Sbjct: 264 PEEVIEKSPE-----PYPHWTLKEIFEQPIALSRALNNGGRLSGYNNRVKLGGLDQYLEE 318
Query: 287 FANISGLLVSSCGTSYLAGLVGKFWFERLARLK-VEIDVSSEFRYRDFVYSSKWASLFIS 345
NI L++ CGTSY A L ++L V++ +SE +FIS
Sbjct: 319 LLNIKNLILVGCGTSYYAALFAASIMQKLKCFNTVQVIDASELTLYRLPDEDAGV-IFIS 377
Query: 346 QSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQ 405
QSGET D + +L L S+VN + S IAR +D + AG E+ VASTKAFT Q
Sbjct: 378 QSGETLDVVRALNLADELNLPKISVVNTVGSLIARSTDCGVYLNAGREVAVASTKAFTSQ 437
Query: 406 LLVLVIMAIYAGKVRGYINEEQE-RELIRSLVEIPRKMFDVLQNIYSQIEKLCCGLAKCQ 464
+ VL ++A++ + + Y + LI SL +P + L++ Q +++ L +
Sbjct: 438 VTVLSLIALWFAQNKEYSCSNYKCSSLINSLHRLPTYIGMTLKSCEEQCKRIAEKLKNAK 497
Query: 465 TLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALI--TEGTFVIAIAPYD 522
++ +G+G YP+ALEGALKIKEI+Y+HAEG++ G LKHGP ALI + T VI I D
Sbjct: 498 SMFILGKGLGYPIALEGALKIKEITYIHAEGFSGGALKHGPFALIDKEKNTPVILIILDD 557
Query: 523 RFFQKTLSNIQEIVTRGGRVIFITDEEGLKRQDFPSIETIVLPSMGEIVSPIVFSLPIQM 582
+ ++ +++ RG +I ITD+E L +DF E I++PS G ++ ++ +P+Q+
Sbjct: 558 EHKELMINAAEQVKARGAYIIVITDDEDLV-KDFAD-EIILIPSNG-PLTALLAVIPLQL 614
Query: 583 IAYCTAVLIGTDVDQPRNLAKSVTV 607
+AY A+L G + D+PR LAK+VTV
Sbjct: 615 LAYEIAILRGINPDKPRGLAKTVTV 639
>gnl|CDD|173585 PTZ00394, PTZ00394, glucosamine-fructose-6-phosphate
aminotransferase; Provisional.
Length = 670
Score = 417 bits (1073), Expect = e-117
Identities = 221/676 (32%), Positives = 351/676 (51%), Gaps = 74/676 (10%)
Query: 1 MCGIVGIVGR------ESVGERLFKALKRLEYRGYDSSGMATICDGKIQC---------- 44
MCGI G E + L ++++EYRGYDS+G+A D I
Sbjct: 1 MCGIFGYANHNVPRTVEQILNVLLDGIQKVEYRGYDSAGLAI--DANIGSEKEDGTAASA 58
Query: 45 -------VRAQGKLSELEK-------ELNKKPLKG----NIGIAHTRWATHGLPNKENSH 86
VR+ G +S+L + P+ ++GIAHTRWATHG + N H
Sbjct: 59 PTPRPCVVRSVGNISQLREKVFSEAVAATLPPMDATTSHHVGIAHTRWATHGGVCERNCH 118
Query: 87 PHCIE--GIAVTHNGIIENFSRLKKEHFSSQQVFLTETDTEVIACLLEK-FIKNGS-SKK 142
P + HNGI+ N+ LK+ F ++TDTEVI+ L E + + G +
Sbjct: 119 PQQSNNGEFTIVHNGIVTNYMTLKELLKEEGYHFSSDTDTEVISVLSEYLYTRKGIHNFA 178
Query: 143 ETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGPPLIIG--------------------- 181
+ ++ + + GSY++ V P + +RKG PL++G
Sbjct: 179 DLALEVSRMVEGSYALLVKSVYFPGQLAASRKGSPLMVGIRRTDDRGCVMKLQTYDLTDL 238
Query: 182 HGEGEMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIYDSQGYE---IERPIQIVQI 238
G E+F SDV + T +V ++EDGD A + L Y++ + ++R +Q +
Sbjct: 239 SGPLEVFFSSDVNSFAEYTREVVFLEDGDIAHYCDGALRFYNAAERQRSIVKREVQHLDA 298
Query: 239 APFLIGKGNYRHFMEKEIYEQPEAISRVLSHYINLSDHTIIPNIFNYDFANISGLLVS-- 296
P + KGNY HFM KEIYEQPE++ + I+ S T+ + + +I +L S
Sbjct: 299 KPEGLSKGNYPHFMLKEIYEQPESVISSMHGRIDFSSGTV--QLSGFTQQSIRAILTSRR 356
Query: 297 ----SCGTSYLAGLVGKFWFERLARLKVEIDVSSEFRYRDFVYSSKWASLFISQSGETAD 352
+CGTS + L + FE L L + ++ +S+F R F+SQSGETAD
Sbjct: 357 ILFIACGTSLNSCLAVRPLFEELVPLPISVENASDFLDRRPRIQRDDVCFFVSQSGETAD 416
Query: 353 TLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIM 412
TL +L+ + G + NV+ S+I+R + + + AG E+GVASTKA+T Q++VL ++
Sbjct: 417 TLMALQLCKEAGAMCVGITNVVGSSISRLTHYAIHLNAGVEVGVASTKAYTSQVVVLTLV 476
Query: 413 AIYAGKVRGYINEEQERELIRSLVEIPRKMFDVLQNIYSQIEKLCCGLAKCQTLLYVGRG 472
A+ + +E+ E+IR L E+P + + L+ + ++ L L + ++L +GRG
Sbjct: 477 ALLLSSDSVRL-QERRNEIIRGLAELPAAISECLKITHDPVKALAARLKESSSILVLGRG 535
Query: 473 SSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTLSNI 532
A+E ALK+KE+SY+H EG +GELKHGP+ALI E + V+A+ +D+ F + S +
Sbjct: 536 YDLATAMEAALKVKELSYVHTEGIHSGELKHGPLALIDETSPVLAMCTHDKHFGLSKSAV 595
Query: 533 QEIVTRGGRVIFITDEEGLKRQDFPSIETIVLPSMGEIVSPIVFSLPIQMIAYCTAVLIG 592
Q++ RGG V+ E + + S E +++P + + +V +P Q++AY A+L G
Sbjct: 596 QQVKARGGAVVVFATEVDAELKAAAS-EIVLVPKTVDCLQCVVNVIPFQLLAYYMALLRG 654
Query: 593 TDVDQPRNLAKSVTVE 608
+VD PRNLAKSVTV+
Sbjct: 655 NNVDCPRNLAKSVTVQ 670
>gnl|CDD|178562 PLN02981, PLN02981, glucosamine:fructose-6-phosphate
aminotransferase.
Length = 680
Score = 397 bits (1023), Expect = e-111
Identities = 234/689 (33%), Positives = 368/689 (53%), Gaps = 90/689 (13%)
Query: 1 MCGIVGIVG------RESVGERLFKALKRLEYRGYDSSGMATICDGKIQ-----CVRAQG 49
MCGI + R + E LF L+RLEYRGYDS+G+A D ++ R +G
Sbjct: 1 MCGIFAYLNYNVPRERRFILEVLFNGLRRLEYRGYDSAGIAIDNDPSLESSSPLVFREEG 60
Query: 50 KLSELEK----ELNKKPLKGN------IGIAHTRWATHGLPNKENSHPHCIEG---IAVT 96
K+ L + E+ + L + GIAHTRWATHG P NSHP V
Sbjct: 61 KIESLVRSVYEEVAETDLNLDLVFENHAGIAHTRWATHGPPAPRNSHPQSSGPGNEFLVV 120
Query: 97 HNGIIENFSRLKKEHFSSQQVFLTETDTEVIACLLEKFIKNGSSKKET-------MQKLM 149
HNGII N+ LK+ F ++TDTEVI L KF+ + +++E + ++M
Sbjct: 121 HNGIITNYEVLKETLLRHGFTFESDTDTEVIP-KLAKFVFDKLNEEEGDVTFSQVVMEVM 179
Query: 150 QCLTGSYSIAVIFEDD--PHSIIVARKGPPLIIGHGEG---------------------- 185
+ L G+Y A+IF+ P+ ++ ++G PL++G E
Sbjct: 180 RQLEGAY--ALIFKSPHYPNELVACKRGSPLLLGVKELPEEKNSSAVFTSEGFLTKNRDK 237
Query: 186 --EMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIY------------DSQGYEIER 231
E F+ SD +A+ T +V +ED + +++ G+ IY S+ +ER
Sbjct: 238 PKEFFLASDASAVVEHTKRVLVIEDNEVVHLKDGGVGIYKFENEKGRGGGGLSRPASVER 297
Query: 232 PIQIVQIAPFLIGKGNYRHFMEKEIYEQPEAIS-----RVLSHYINLSDHTIIPNIFNYD 286
+ +++ I KGNY H+M+KEI+EQPE+++ R++ + ++ + ++
Sbjct: 298 ALSTLEMEVEQIMKGNYDHYMQKEIHEQPESLTTTMRGRLIRGGSGKAKRVLLGGLKDH- 356
Query: 287 FANISG---LLVSSCGTSYLAGLVGKFWFERLARLKVEIDVSSEFRYRDFVYSSKWASLF 343
I ++ CGTSY A L + E L+ + V ++++S+ R + ++F
Sbjct: 357 LKTIRRSRRIVFIGCGTSYNAALAARPILEELSGVPVTMELASDLLDRQGPIYREDTAVF 416
Query: 344 ISQSGETADTLASLRYMRTQG-LTIGSLVNVLESTIARESDFIFPIKAGPEIGVASTKAF 402
+SQSGETADTL +L Y + G L +G + N + S I+R + I AG EIGVASTKA+
Sbjct: 417 VSQSGETADTLRALEYAKENGALCVG-ITNTVGSAISRGTHCGVHINAGAEIGVASTKAY 475
Query: 403 TCQLLVLVIMAIYAGKVRGYINEEQERE-LIRSLVEIPRKMFDVLQNIYSQIEKLCCGLA 461
T Q++ + ++A+ G+ I+ RE +I L ++P K+ +VL+ + ++++L L
Sbjct: 476 TSQIVAMTMLALALGE--DSISSRSRREAIIDGLFDLPNKVREVLK-LDQEMKELAELLI 532
Query: 462 KCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPY 521
Q+LL GRG +Y ALEGALK+KE++ +H+EG AGE+KHGP+AL+ E +I IA
Sbjct: 533 DEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDETLPIIVIATR 592
Query: 522 DRFFQKTLSNIQEIVTRGGRVIFITDEEGLKRQDFPSIE--TIVLPSMGEIVSPIVFSLP 579
D F K S IQ++ R GR+I I +G PS I +P + + + P++ +P
Sbjct: 593 DACFSKQQSVIQQLRARKGRLIVICS-KGDASSVCPSGGCRVIEVPQVEDCLQPVINIVP 651
Query: 580 IQMIAYCTAVLIGTDVDQPRNLAKSVTVE 608
+Q++AY VL G +VDQPRNLAKSVT +
Sbjct: 652 LQLLAYHLTVLRGHNVDQPRNLAKSVTTQ 680
>gnl|CDD|162218 TIGR01134, purF, amidophosphoribosyltransferase. Alternate name:
glutamine phosphoribosylpyrophosphate (PRPP)
amidotransferase.
Length = 442
Score = 125 bits (316), Expect = 4e-29
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 21/231 (9%)
Query: 2 CGIVGIVGRESVGERL-FKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
CG+VGI +E L + L L++RG +++G+A KI+ + G +S++ E +
Sbjct: 1 CGVVGIYSQEEDAASLTYYGLYALQHRGQEAAGIAVSDGNKIRTHKGNGLVSDVFDERHL 60
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHPHCIE---GIAVTHNGIIENFSRLKKEHFSSQQV 117
+ LKGN+GI H R++T G + N+ P + GIA+ HNG + N L++E ++
Sbjct: 61 ERLKGNVGIGHVRYSTAGSSSLSNAQPFVVNSPGGIALAHNGNLVNAEELREELEEEGRI 120
Query: 118 FLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFED------DPHSIIV 171
F T +D+EV+ LL + E + ++++ + G+Y++ ++ D DPH I
Sbjct: 121 FNTTSDSEVLLHLLARERLEEDDLFEAIARVLKRVRGAYALVIMIGDGLIAVRDPHGI-- 178
Query: 172 ARKGPPLIIGHGEGEMFVGSDVTALTLLTDKVTYMED---GDWAIIRNSGL 219
R PL++G V S+ AL +L ++ D G+ +I + GL
Sbjct: 179 -R---PLVLGKRGDGYVVASESCALDILGA--EFIRDVEPGEAVVIDDGGL 223
>gnl|CDD|180262 PRK05793, PRK05793, amidophosphoribosyltransferase; Provisional.
Length = 469
Score = 107 bits (268), Expect = 1e-23
Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 23/232 (9%)
Query: 2 CGIVGIVGRE--SVGERLFKALKRLEYRGYDSSGMATICDG-KIQCVRAQGKLSELEKEL 58
CG+ G+ + V + L L++RG +S+G+A + DG KI+ + G +SE+ +
Sbjct: 15 CGVFGVFSKNNIDVASLTYYGLYALQHRGQESAGIA-VSDGEKIKVHKGMGLVSEVFSKE 73
Query: 59 NKKPLKGNIGIAHTRWATHGLPNKENSHP----HCIEGIAVTHNGIIENFSRLKKEHFSS 114
K LKGN I H R++T G + +N+ P + + IA+ HNG + N +++
Sbjct: 74 KLKGLKGNSAIGHVRYSTTGASDLDNAQPLVANYKLGSIAIAHNGNLVNADVIRELLEDG 133
Query: 115 QQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFED------DPHS 168
++F T D+EVI L+ + K G ++ + +Q + GSY++ ++ ED DPH
Sbjct: 134 GRIFQTSIDSEVILNLIARSAKKGL--EKALVDAIQAIKGSYALVILTEDKLIGVRDPHG 191
Query: 169 IIVARKGPPLIIGHGEGEMFVGSDVTAL-TLLTDKVTYMEDGDWAIIRNSGL 219
I PL +G + + S+ AL T+ + + +E G+ II G+
Sbjct: 192 I------RPLCLGKLGDDYILSSESCALDTIGAEFIRDVEPGEIVIIDEDGI 237
>gnl|CDD|102351 PRK06388, PRK06388, amidophosphoribosyltransferase; Provisional.
Length = 474
Score = 96.9 bits (241), Expect = 2e-20
Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 12/236 (5%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKK 61
C +VG G + + AL+ L++RG +S+GMA KI + G ++++
Sbjct: 20 CAVVGFKGGINAYSPIITALRTLQHRGQESAGMAVFDGRKIHLKKGMGLVTDVFNPAT-D 78
Query: 62 PLKGNIGIAHTRWATHGLPNKENSHPHCIEG----IAVTHNGIIENFSRLKKEHFSSQQV 117
P+KG +G+ HTR++T G EN+ P I I ++HNG I N L++E +
Sbjct: 79 PIKGIVGVGHTRYSTAGSKGVENAGPFVINSSLGYIGISHNGEIVNADELREEMKKEGYI 138
Query: 118 FLTETDTEVIACLLEKFIKNGSSK--KETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKG 175
F +++DTEV +L + +N S KE ++ M+ L G+Y+ A++ D ++I
Sbjct: 139 FQSDSDTEV---MLAELSRNISKYGLKEGFERSMERLRGAYACALMINDRLYAIRDPNGI 195
Query: 176 PPLIIGHGEGEMFVGSDVTALTLLTDK-VTYMEDGDWAIIRNSGL-TIYDSQGYEI 229
PL++G + S+ A+ L+ + +E G+ + ++G TI+ G ++
Sbjct: 196 RPLVLGKNFDGYIIASESCAIDALSGTTIKNVEPGEVVEVFDNGYKTIFKLDGDKV 251
>gnl|CDD|178059 PLN02440, PLN02440, amidophosphoribosyltransferase.
Length = 479
Score = 94.7 bits (236), Expect = 7e-20
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 27/214 (12%)
Query: 1 MCGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
CG+VGI G + L L++RG + +G+ T+ ++Q + G +S++ E
Sbjct: 1 ECGVVGIFGDPEASRLCYLGLHALQHRGQEGAGIVTVDGNRLQSITGNGLVSDVFDESKL 60
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHPHCIE----GIAVTHNGIIENFSRLKKEHFSSQQ 116
L G+I I H R++T G + +N P I V HNG + N+ L+ + +
Sbjct: 61 DQLPGDIAIGHVRYSTAGASSLKNVQPFVANYRFGSIGVAHNGNLVNYEELRAKLEENGS 120
Query: 117 VFLTETDTEVIACLLEKFIKNGSSKKETM----QKLMQCLTGSYSIAVIFED------DP 166
+F T +DTEV+ L+ SK + L G+YS+ + ED DP
Sbjct: 121 IFNTSSDTEVLLHLIAI------SKARPFFSRIVDACEKLKGAYSMVFLTEDKLVAVRDP 174
Query: 167 HSIIVARKGPPLIIG-HGEGEMFVGSDVTALTLL 199
H PL++G G + S+ AL L+
Sbjct: 175 HGF------RPLVMGRRSNGAVVFASETCALDLI 202
>gnl|CDD|181724 PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.
Length = 501
Score = 90.2 bits (225), Expect = 1e-18
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 38/223 (17%)
Query: 1 MCGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
MCGIVGIVG V + ++ AL L++RG D++G+ TI + + +A G + ++ + +
Sbjct: 1 MCGIVGIVGHSPVNQSIYDALTVLQHRGQDAAGIVTIDGNRFRLRKANGLVRDVFRTRHM 60
Query: 61 KPLKGNIGIAHTRWATHGLPNKE-------NSHPHCIEGIAVTHNGIIENFSRLKKEHFS 113
+ L+GN+GI H R+ T G + NS P+ GI + HNG + N L+KE F
Sbjct: 61 RRLQGNMGIGHVRYPTAGSSSSAEAQPFYVNS-PY---GITLAHNGNLTNAEELRKELFE 116
Query: 114 SQQVFL-TETDTE----VIACLLEKFIKNGSSKKE---TMQKLMQCLTGSYS-IAVI--- 161
+ + T +D+E V A L+KF + ++ + + + + G+Y+ +A+I
Sbjct: 117 KDRRHINTTSDSEVLLNVFAHELQKFRGLPLTPEDIFAAVAAVHRRVRGAYAVVAMIIGH 176
Query: 162 ----FEDDPHSIIVARKGPPLIIGH----GEGEMFVGSDVTAL 196
F DPH I R PL++G G E V S+ AL
Sbjct: 177 GLVAFR-DPHGI---R---PLVLGKRETEGGTEYMVASESVAL 212
>gnl|CDD|181395 PRK08341, PRK08341, amidophosphoribosyltransferase; Provisional.
Length = 442
Score = 89.9 bits (223), Expect = 2e-18
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 15/216 (6%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKK 61
CGI + ++ + AL L++RG + +G+ ++ +I+ V+ G +SE+ K +
Sbjct: 5 CGIFAAYSENAP-KKAYYALIALQHRGQEGAGI-SVWRHRIRTVKGHGLVSEVFKGGSLS 62
Query: 62 PLKGNIGIAHTRWATHGLPNKENSHPH----CIEGIAVTHNGIIENFSRLKKEHFSSQQV 117
LK N+ I H R++T G ++ P C IA+ HNG + NF L++++ S
Sbjct: 63 RLKSNLAIGHVRYSTSGSLSE--VQPLEVECCGYKIAIAHNGTLTNFLPLRRKYESRGVK 120
Query: 118 FLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGP- 176
F + DTE+I + E M+++ + G+YS+A++F+ IIVAR
Sbjct: 121 FRSSVDTELIGISFLWHYSETGDEFEAMREVFNEVKGAYSVAILFDG---KIIVARDPVG 177
Query: 177 --PLIIGHGEGEMFVGSDVTALTLLTDKVTYMEDGD 210
PL G G+G F D +AL + +++ + G+
Sbjct: 178 FRPLSYGEGDGHYFASED-SALRMFVNEIRDVFPGE 212
>gnl|CDD|136048 PRK06781, PRK06781, amidophosphoribosyltransferase; Provisional.
Length = 471
Score = 79.3 bits (195), Expect = 2e-15
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKK 61
CG+ GI G E+ + + L L++RG + +G+ KI + G +SE+ +
Sbjct: 12 CGVFGIWGHENAAQVSYYGLHSLQHRGQEGAGIVVNNGEKIVGHKGLGLISEVFSRGELE 71
Query: 62 PLKGNIGIAHTRWATHGLPNKENSHPHCIE----GIAVTHNGIIENFSRLKKEHFSSQQV 117
L G I H R+AT G N P +A+ HNG + N L++E + +
Sbjct: 72 GLNGKSAIGHVRYATAGGSEVANVQPLLFRFSDHSMALAHNGNLINAKMLRRELEAEGSI 131
Query: 118 FLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGPP 177
F T +DTEV+ L+++ K S E++++ + + G+++ ++ ++ + P
Sbjct: 132 FQTSSDTEVLLHLIKRSTK--DSLIESVKEALNKVKGAFAYLLLTGNEMIVALDPNGFRP 189
Query: 178 LIIGHGEGEMFVGSDVTAL-TLLTDKVTYMEDGDWAIIRNSGLTI 221
L IG V S+ A + + +E G+ II + G+ +
Sbjct: 190 LSIGKMGDAYVVASETCAFDVVGATYIRDVEPGELLIINDEGIHV 234
>gnl|CDD|180940 PRK07349, PRK07349, amidophosphoribosyltransferase; Provisional.
Length = 500
Score = 77.0 bits (190), Expect = 1e-14
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 2 CGIVGI-VGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
CG+ G+ E V + + L L++RG +S+G+AT K+ + G +S++ E
Sbjct: 34 CGVFGVYAPGEEVAKLTYFGLYALQHRGQESAGIATFEGDKVHLHKDMGLVSQVFDEDIL 93
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHPHCIE----GIAVTHNGIIENFSRLKKEHFSSQQ 116
+ L G++ + HTR++T G K N+ P +E +A+ HNG + N L++E +
Sbjct: 94 EELPGDLAVGHTRYSTTGSSRKANAQPAVLETRLGPLALAHNGNLVNTVELREELLARGC 153
Query: 117 VFLTETDTEVIACLLEKFIKNGSSKKE-TMQKLMQCLTGSYSI------AVIFEDDPHSI 169
T TD+E+IA + + + G E + +C G++S+ ++ DP+ I
Sbjct: 154 ELTTTTDSEMIAFAIAQAVDAGKDWLEAAISAFQRC-QGAFSLVIGTPEGLMGVRDPNGI 212
Query: 170 IVARKGPPLIIG 181
PL+IG
Sbjct: 213 ------RPLVIG 218
>gnl|CDD|181061 PRK07631, PRK07631, amidophosphoribosyltransferase; Provisional.
Length = 475
Score = 76.0 bits (187), Expect = 3e-14
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 23/232 (9%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKK 61
CG+ GI G E + + L L++RG + +G+ GK+ + G ++E+ +
Sbjct: 12 CGVFGIWGHEEAAQITYYGLHSLQHRGQEGAGIVVTDGGKLSAHKGLGLVTEVFQNGELD 71
Query: 62 PLKGNIGIAHTRWATHGLPNKENSHPHCIE----GIAVTHNGIIENFSRLKKEHFSSQQV 117
LKG I H R+AT G EN P +A+ HNG + N ++LK + + +
Sbjct: 72 ALKGKAAIGHVRYATAGGGGYENVQPLLFRSQTGSLALAHNGNLVNATQLKLQLENQGSI 131
Query: 118 FLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFED------DPHSIIV 171
F T +DTEV+A L+++ + KE ++ + L G+Y+ ++ E DP+ +
Sbjct: 132 FQTTSDTEVLAHLIKR--SGAPTLKEQIKNALSMLKGAYAFLLMTETELYVALDPNGL-- 187
Query: 172 ARKGPPLIIGHGEGEMFVGSDVTALTLLTDKVTYMED---GDWAIIRNSGLT 220
PL IG V S+ A ++ TY + G+ II + G+
Sbjct: 188 ----RPLSIGRLGDAYVVASETCAFDVI--GATYEREVEPGELLIINDEGMR 233
>gnl|CDD|181456 PRK08525, PRK08525, amidophosphoribosyltransferase; Provisional.
Length = 445
Score = 74.7 bits (184), Expect = 6e-14
Identities = 63/255 (24%), Positives = 125/255 (49%), Gaps = 35/255 (13%)
Query: 1 MCGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
MC +VG++ ++ + + AL +++RG ++SG++ KI+ ++ +G ++++ E N
Sbjct: 1 MCAVVGVINSKNAAKLAYYALFAMQHRGQEASGISVSNGKKIKTIKGRGLVTQVFNEDNL 60
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHP----HCIEGIAVTHNGIIENFSRLKKEHFSSQQ 116
K LKG I I H R++T G + ++ P + + IA+ HNG + N ++
Sbjct: 61 KTLKGEIAIGHNRYSTAGNDSILDAQPVFARYDLGEIAIVHNGNLVNKKEVRSRLIQDGA 120
Query: 117 VFLTETDTEVIACLLEKFIKNGSSKKETMQ-KLMQCLT---GSYSIAVIFED------DP 166
+F T DTE + L+ + SKKE+++ ++++ L G+Y + ++ DP
Sbjct: 121 IFQTNMDTENLIHLIAR------SKKESLKDRIIEALKKIIGAYCLVLLSRSKMFAIRDP 174
Query: 167 HSIIVARKGPPLIIGH-GEGEMFVGSDVTALTLLTDKVTYMEDGDWAIIRNSGLTIYDSQ 225
H + PL +G +G V S+ A L+ ++ D ++ + I++
Sbjct: 175 HGV------RPLSLGRLKDGGYIVASETCAFDLI--GAEFIRD-----VKPGEMLIFEQG 221
Query: 226 GYEIERPIQIVQIAP 240
E E IQ+ + P
Sbjct: 222 NDEFES-IQLFEPTP 235
>gnl|CDD|180913 PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.
Length = 484
Score = 73.6 bits (181), Expect = 1e-13
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK- 60
CG+ GI G + + L L++RG + +G+ + +GK++ R G LSE+ K+
Sbjct: 12 CGVFGIWGHPDAAQLTYFGLHSLQHRGQEGAGIVSNDNGKLKGHRDLGLLSEVFKDPADL 71
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHP---HCIEG-IAVTHNGIIENFSRLKKEHFSSQQ 116
L G I H R+AT G + EN P H + + HNG + N L+KE
Sbjct: 72 DKLTGQAAIGHVRYATAGSASIENIQPFLFHFHDMQFGLAHNGNLTNAVSLRKELEKQGA 131
Query: 117 VFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLT---GSYSIAVIFED------DPH 167
+F + +DTE++ L+ + S M KL + L G ++ ++ ED DP+
Sbjct: 132 IFHSSSDTEILMHLIRR-----SHNPTFMGKLKEALNTVKGGFAYLLLTEDKLIAALDPN 186
Query: 168 SIIVARKGPPLIIGHGE-GEMFVGSDVTALTLLTDK-VTYMEDGDWAIIRNSGLTI 221
PL IG + G V S+ A ++ + V ++ G+ II + G+
Sbjct: 187 GF------RPLSIGKMKNGAYVVASETCAFDVVGAEWVRDVQPGEIVIIDDEGIQY 236
>gnl|CDD|181660 PRK09123, PRK09123, amidophosphoribosyltransferase; Provisional.
Length = 479
Score = 68.0 bits (167), Expect = 6e-12
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 2 CGIVGIVGRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSEL---EKEL 58
CG+ GI+G L L++RG +++G+ + + R G + + +
Sbjct: 22 CGVFGILGHPDAAALTALGLHALQHRGQEAAGIVSFDGERFHSERRMGLVGDHFTDADVI 81
Query: 59 NKKPLKGNIGIAHTRWATHGLPNKENSHPHCIE----GIAVTHNGIIENFSRLKKEHFSS 114
+ L GN I H R++T G N P E G+A+ HNG + N L++E
Sbjct: 82 AR--LPGNRAIGHVRYSTTGETILRNVQPLFAELEFGGLAIAHNGNLTNALTLRRELIRR 139
Query: 115 QQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARK 174
+F + +DTEVI L+ + K + ++ + G+YS+ + +I AR
Sbjct: 140 GAIFQSTSDTEVILHLIARSRKASFL--DRFIDALRQVEGAYSLVAL---TNTKLIGARD 194
Query: 175 GP----PLIIGHGEGEMFVGSDVTAL 196
P PL++G +G + S+ AL
Sbjct: 195 -PLGIRPLVLGELDGSPILASETCAL 219
>gnl|CDD|178164 PLN02549, PLN02549, asparagine synthase (glutamine-hydrolyzing).
Length = 578
Score = 57.1 bits (138), Expect = 1e-08
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 48/204 (23%)
Query: 1 MCGIVGIVGRESVG----ERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEK 56
MCGI+ ++G R+ + +RL +RG D SG+ G C A +L+ ++
Sbjct: 1 MCGILAVLGCSDDSQAKRSRVLELSRRLRHRGPDWSGL----YGNEDCYLAHERLAIMDP 56
Query: 57 ELNKKPLKGNIGIAHTRWATHGLPNKENSHPHCIEGIAVTHNGIIENFSRLKKEHFSSQQ 116
E +PL N++ + I VT NG I N L+++
Sbjct: 57 ESGDQPLY----------------NEDKT-------IVVTANGEIYNHKELREKL--KLH 91
Query: 117 VFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKG- 175
F T +D EVIA L E+ G ++ + L G +S V+ + +S I AR
Sbjct: 92 KFRTGSDCEVIAHLYEEH---G-------EEFVDMLDGMFSF-VLLDTRDNSFIAARDHI 140
Query: 176 --PPLIIGHGE-GEMFVGSDVTAL 196
PL IG G G ++ S++ AL
Sbjct: 141 GITPLYIGWGLDGSVWFASEMKAL 164
>gnl|CDD|181851 PRK09431, asnB, asparagine synthetase B; Provisional.
Length = 554
Score = 56.5 bits (137), Expect = 2e-08
Identities = 47/220 (21%), Positives = 84/220 (38%), Gaps = 63/220 (28%)
Query: 1 MCGIVGIVGRESVGERL----FKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEK 56
MCGI GI+ ++ + L + + + +RG D SG+ D I
Sbjct: 1 MCGIFGILDIKTDADELRKKALEMSRLMRHRGPDWSGI-YASDNAI-------------- 45
Query: 57 ELNKKPLKGNIGIAHTRWA----THG---LPNKENSHPHCIEGIAVTHNGIIENFSRLKK 109
+ H R + G L N++ +H +AV NG I N L+
Sbjct: 46 ------------LGHERLSIVDVNGGAQPLYNEDGTH-----VLAV--NGEIYNHQELRA 86
Query: 110 EHFSSQQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSI 169
E + F T +D EVI L ++ + L G ++ +++ + +
Sbjct: 87 E-LGDKYAFQTGSDCEVILALYQEKGPDFLDD----------LDGMFAF-ALYDSEKDAY 134
Query: 170 IVARKGP----PLIIGH-GEGEMFVGSDVTALTLLTDKVT 204
++AR P PL G+ G ++ S++ AL + +
Sbjct: 135 LIARD-PIGIIPLYYGYDEHGNLYFASEMKALVPVCKTIK 173
>gnl|CDD|181143 PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional.
Length = 510
Score = 52.7 bits (127), Expect = 3e-07
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 2 CGIVGIVGR-ESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNK 60
CG+ G+ E V + + L L++RG +++G+A +I + G +S++ E
Sbjct: 24 CGVFGVWAPGEEVAKLTYYGLYALQHRGQEAAGIAVSDGSQILVFKDLGLVSQVFDEQTL 83
Query: 61 KPLKGNIGIAHTRWATHGLPNKENSHP-----HCIEGIAVTHNGIIENFSRLKKEHFSSQ 115
L+G++ I H R++T G EN+ P G+A+ HNG + N + L
Sbjct: 84 ASLQGHVAIGHCRYSTTGASTWENAQPTFRATAAGGGVALGHNGNLVNTAELAARARDRG 143
Query: 116 QVFLTE-----TDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFED------ 164
+ + TDT+++ LL + + ++ +L+ + G++ + +F D
Sbjct: 144 LIRGRDPAGATTDTDLVTALLAHGAADSTL-EQAALELLPTVRGAFCL--VFMDEHTLYA 200
Query: 165 --DPHSIIVARKGPPLIIGHGEGEMFVGSDVTAL 196
DP + R PL++G E V S+ AL
Sbjct: 201 ARDPQGV---R---PLVLGRLERGWVVASETAAL 228
>gnl|CDD|185431 PTZ00077, PTZ00077, asparagine synthetase-like protein;
Provisional.
Length = 586
Score = 43.9 bits (104), Expect = 1e-04
Identities = 55/209 (26%), Positives = 83/209 (39%), Gaps = 48/209 (22%)
Query: 1 MCGIVGIVGRESVGER---LFKAL---KRLEYRGYDSSGMATICDGKIQCVRAQGKLSEL 54
MCGI+ I S GER KAL KRL +RG D SG+ + E
Sbjct: 1 MCGILAIFN--SKGERHELRRKALELSKRLRHRGPDWSGI---------------IVLEN 43
Query: 55 EKELNKKPLKGNIGIAHTRWATHGLPNKENSHPHCI--EGIAVTHNGIIENFSRLKKEHF 112
NI +AH R A L + P E +A+ NG I N ++ E
Sbjct: 44 SPGTY------NI-LAHERLAIVDLSD--GKQPLLDDDETVALMQNGEIYNHWEIRPELE 94
Query: 113 SSQQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVA 172
F + +D E+I L +++ L G ++ VI++ ++ A
Sbjct: 95 KEGYKFSSNSDCEIIGHLYKEYGPK---------DFWNHLDGMFAT-VIYDMKTNTFFAA 144
Query: 173 RKG---PPLIIGHGE-GEMFVGSDVTALT 197
R PL IG+ + G ++ S++ AL
Sbjct: 145 RDHIGIIPLYIGYAKDGSIWFSSELKALH 173
>gnl|CDD|131862 TIGR02815, agaS_fam, putative sugar isomerase, AgaS family. Some
members of this protein family are found in regions
associated with N-acetyl-galactosamine and galactosamine
untilization and are suggested to be isomerases.
Length = 372
Score = 43.6 bits (103), Expect = 1e-04
Identities = 47/215 (21%), Positives = 80/215 (37%), Gaps = 29/215 (13%)
Query: 395 GVASTKAFTCQ----LLVLVIMAIYAGKVRGYINEEQERELIRSLVEIPRKMFDVLQNIY 450
A T +F+C L VL I + +ER +L + +D
Sbjct: 158 SFAMTSSFSCMTLATLAVLGPETIESQ--------TEERFADAALCILESGQWD------ 203
Query: 451 SQIEKLCCGLAKCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGEL--KHGPIAL 508
L A + ++Y+G G LA E ALK+ E++ + L +HGP +L
Sbjct: 204 FSEGVLGY--APWERIVYLGSGGLQGLARESALKVLELTAGKVMAFYDSSLGFRHGPKSL 261
Query: 509 ITEGTFVIAIA---PYDRFFQKTLSNIQEIVTRG--GRVIFITDEEGLKRQDFPSIETIV 563
+ + T V+ PY R Q L + E+ GRV+ I+ E
Sbjct: 262 VDDETLVVVYVSSDPYTR--QYDLDLLAELRRDNQAGRVVAISAESSDIVAAGDHFILPP 319
Query: 564 LPSMGEIVSPIVFSLPIQMIAYCTAVLIGTDVDQP 598
++ + + Q +A+ ++ +G D P
Sbjct: 320 SRHFIDVELAFPYLIFAQTLAFEQSLALGNTPDNP 354
>gnl|CDD|162406 TIGR01536, asn_synth_AEB, asparagine synthase
(glutamine-hydrolyzing). This model describes the
glutamine-hydrolysing asparagine synthase. A poorly
conserved C-terminal extension was removed from the
model. Bacterial members of the family tend to have a
long, poorly conserved insert lacking from archaeal and
eukaryotic sequences. Multiple isozymes have been
demonstrated, such as in Bacillus subtilis. Long-branch
members of the phylogenetic tree (which typically were
also second or third candidate members from their
genomes) were removed from the seed alignment and score
below trusted cutoff.
Length = 467
Score = 43.9 bits (104), Expect = 1e-04
Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 46/215 (21%)
Query: 4 IVGIVGRESVGERLFKALKR----LEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELN 59
I G + +A+ R + +RG D+SG I + +L+ ++
Sbjct: 1 IAGFFDLDDKAVEEDEAILRMSDTIAHRGPDASG---IEYKDGNAILGHRRLAIIDLSGG 57
Query: 60 KKPLKGNIGIAHTRWATHGLPNKENSHPHCIEGIAVTHNGIIENFSRLKKEHFSSQQVFL 119
+P+ T + NG I N L++E + F
Sbjct: 58 AQPMSNEGK---TYV--------------------IVFNGEIYNHEELREELEAKGYTFQ 94
Query: 120 TETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARKGP--- 176
T++DTEVI L E++ +E + + L G ++ A+ D + +
Sbjct: 95 TDSDTEVILHLYEEW------GEECVDR----LDGMFAFALW--DSKKGELFLARDRFGI 142
Query: 177 -PLIIGHGEGEMFVGSDVTALTLLTDKVTYMEDGD 210
PL + G+++ S++ AL + DG
Sbjct: 143 KPLYYAYDGGQLYFASEIKALLAHPRNIKPFPDGA 177
>gnl|CDD|180083 PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase;
Reviewed.
Length = 299
Score = 42.8 bits (102), Expect = 2e-04
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 344 ISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKA--GPEIGVAST-- 399
I+ SG T + +L Y R +G + S +++E+D I+ GPE+ ST
Sbjct: 138 IAASGRTPYVIGALEYARERGALTIGISCNPGSPLSKEAD--IAIEVVVGPEVLTGSTRM 195
Query: 400 KAFTCQLLVL----VIMAIYAGKVRG 421
KA T Q LVL + I GKV G
Sbjct: 196 KAGTAQKLVLNMISTGVMIRLGKVYG 221
>gnl|CDD|183111 PRK11382, frlB, fructoselysine-6-P-deglycase; Provisional.
Length = 340
Score = 42.7 bits (100), Expect = 3e-04
Identities = 68/346 (19%), Positives = 136/346 (39%), Gaps = 39/346 (11%)
Query: 261 EAISRVLSHYINLSDHTIIPNIFNYDFANISGLLVSSCGTSYLAGLVGKFWFERLARLKV 320
+ + +VLSH + L H I+ + D I + +CG+ A K +R + L+V
Sbjct: 19 QEVEKVLSHDVPLV-HAIVEEMVKRD---IDRIYFVACGSPLNAAQTAKHLADRFSDLQV 74
Query: 321 EIDVSSEF----RYRDFVYSSKWASLFISQSGETADTLASLRYMRTQGLTIGSLVNVLES 376
EF YR + A + +S G+T + + +L R G + +S
Sbjct: 75 YAISGWEFCDNTPYR---LDDRCAVIGVSDYGKTEEVIKALELGRACGALTAAFTKRADS 131
Query: 377 TIARESDFIFPIKAGPEIGVASTKAFTCQLLVLVIMAIYA--GKVRGYINEEQERELIRS 434
I ++F +A + ++ L ++ +A A GK++
Sbjct: 132 PITSAAEFSIDYQADCIWEIHLLLCYSVVLEMITRLAPNAEIGKIKN------------D 179
Query: 435 LVEIPRKMFDVLQNIYSQIEKLCCGLAKCQTLLYVGRGSSYPLAL-EGALKIKEISYLHA 493
L ++P + +++ + +L ++ + V G PL EG + + E ++ H
Sbjct: 180 LKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGPLRPLGYKEGIVTLMEFTWTHG 239
Query: 494 EGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTLSNIQEIVTRGGRVIFITDEEGLKR 553
+GE +HGP+ ++ G + + D T I + R VI I
Sbjct: 240 CVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTERAINFVKQRTDNVIVI-------- 291
Query: 554 QDFPSIETIVLPSMGEIVSPIVFSLPIQMIAYCTAVLIGTDVDQPR 599
D+ I + P + +P + +P++ + Y ++ + D+ R
Sbjct: 292 -DYAEISQGLHPWL----APFLMFVPMEWLCYYLSIYKDHNPDERR 332
>gnl|CDD|132152 TIGR03108, eps_aminotran_1, exosortase 1 system-associated
amidotransferase 1. The predicted protein-sorting
transpeptidase that we call exosortase (see TIGR02602)
has distinct subclasses that associated with different
types of exopolysaccharide production loci. This model
represents a distinct clade among a set of
amidotransferases largely annotated (not necessarily
accurately) as glutatime-hydrolyzing asparagine
synthases. Members of this clade are essentially
restricted to the characteristic exopolysaccharide (EPS)
regions that contain the exosortase 1 genome (xrtA), in
genomes that also have numbers of PEP-CTERM domain
(TIGR02595) proteins.
Length = 628
Score = 40.5 bits (95), Expect = 0.001
Identities = 36/138 (26%), Positives = 49/138 (35%), Gaps = 45/138 (32%)
Query: 1 MCGIVGIV---GRESVGERLFKAL-KRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEK 56
MCGI GI G+ + L + + +RG D G+ G
Sbjct: 1 MCGITGIFDLTGQRPIDRDLLRRMNDAQAHRGPDGGGVH----------VEPG------- 43
Query: 57 ELNKKPLKGNIGIAHTRWAT-------HGLPNKENSHPHCIEGIAVTHNGIIENFSRLKK 109
IG+ H R + L N++ S + V NG I NF L
Sbjct: 44 ----------IGLGHRRLSIIDLSGGQQPLFNEDGS-------VVVVFNGEIYNFQELVA 86
Query: 110 EHFSSQQVFLTETDTEVI 127
E + VF T +DTEVI
Sbjct: 87 ELQALGHVFRTRSDTEVI 104
>gnl|CDD|129375 TIGR00274, TIGR00274, N-acetylmuramic acid 6-phosphate etherase.
This protein, MurQ, is involved in recycling components
of the bacterial murein sacculus turned over during cell
growth. The cell wall metabolite anhydro-N-acetylmuramic
acid (anhMurNAc) is converted by a kinase, AnmK, to
MurNAc-phosphate, then converted to
N-acetylglucosamine-phosphate by this etherase, called
MurQ. This family of proteins is similar to the
C-terminal half of a number of vertebrate glucokinase
regulator proteins and contains a Prosite pattern which
is shared by this group of proteins in a region of local
similarity.
Length = 291
Score = 39.1 bits (91), Expect = 0.003
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 344 ISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVAST--KA 401
I+ SG T +A L+Y R+ G S+ +S + +D GPEI S+ KA
Sbjct: 133 IAASGRTPYVIAGLQYARSLGALTISIACNPKSAASEIADIAIETIVGPEILTGSSRLKA 192
Query: 402 FTCQLLVLVIMA----IYAGKVRG 421
T Q +VL +++ I GKV
Sbjct: 193 GTAQKMVLNMLSTASMIKLGKVYE 216
>gnl|CDD|163136 TIGR03104, trio_amidotrans, asparagine synthase family
amidotransferase. Members of this protein family are
closely related to several isoforms of asparagine
synthetase (glutamine amidotransferase) and typically
have been given this name in genome annotation to date.
Each is part of a conserved three-gene cassette sparsely
distributed across at least twenty different species
known so far, including alpha, beta, and gamma
Proteobacteria, Mycobacterium, and Prosthecochloris,
which is a member of the Chlorobi. The other two members
of the cassette are a probable protease and a member of
the GNAT family of acetyltransferases.
Length = 589
Score = 38.1 bits (89), Expect = 0.007
Identities = 50/205 (24%), Positives = 78/205 (38%), Gaps = 49/205 (23%)
Query: 1 MCGIVGIV---GRESVGERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKE 57
MCGI G + G+ + + L L RG D+ G V AQG
Sbjct: 1 MCGICGEIRFDGQAPDVAAVVRMLAVLAPRGPDAGG-----------VHAQG-------- 41
Query: 58 LNKKPLKGNIGIAHTRWATHGLPNKENSHPHCIE---GIAVTHNGIIENFSRLKKEHFSS 114
+ + H R L E S ++ G+A+ NG I N+ L+ E +
Sbjct: 42 --------PVALGHRRLKIIDL--SEASQQPMVDAELGLALVFNGCIYNYRELRAELEAL 91
Query: 115 QQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTGSYSIAVIFEDDPHSIIVARK 174
F ++ DTEVI L+ + G + + G ++ A I+E D +++AR
Sbjct: 92 GYRFFSDGDTEVI---LKAYHAWG-------RDCVSRFNGMFAFA-IWERDSGRLLLARD 140
Query: 175 G---PPLIIGHGEGEMFVGSDVTAL 196
PL G + S + AL
Sbjct: 141 RLGIKPLYYAEDAGRLRFASSLPAL 165
>gnl|CDD|182814 PRK10892, PRK10892, D-arabinose 5-phosphate isomerase; Provisional.
Length = 326
Score = 33.5 bits (77), Expect = 0.18
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 342 LFISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPE---IGVAS 398
+ IS SGE+++ LA + ++ + + + ES++AR +D +K E +G+A
Sbjct: 99 IAISNSGESSEILALIPVLKRLHVPLICITGRPESSMARAADIHLCVKVPKEACPLGLAP 158
Query: 399 TKAFTCQLLVLVIMAIYAGKVRGYINEE 426
T + T L++ +A+ K RG+ E+
Sbjct: 159 TSSTTATLVMGDALAVALLKARGFTAED 186
>gnl|CDD|183600 PRK12570, PRK12570, N-acetylmuramic acid-6-phosphate etherase;
Reviewed.
Length = 296
Score = 32.7 bits (75), Expect = 0.24
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 344 ISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPEIGVAST--KA 401
I+ SG T + +L Y + G T +L +S IA+ +D GPE+ ST K+
Sbjct: 134 IAASGRTPYVIGALEYAKQIGATTIALSCNPDSPIAKIADIAISPVVGPEVLTGSTRLKS 193
Query: 402 FTCQLLVL 409
T Q +VL
Sbjct: 194 GTAQKMVL 201
>gnl|CDD|129488 TIGR00393, kpsF, KpsF/GutQ family protein. This model describes a
number of closely related proteins with the
phosphosugar-binding domain SIS (Sugar ISomerase)
followed by two copies of the CBS (named after
Cystathionine Beta Synthase) domain. One is GutQ, a
protein of the glucitol operon. Another is KpsF, a
virulence factor involved in capsular polysialic acid
biosynthesis in some pathogenic strains of E. coli.
Length = 268
Score = 31.7 bits (72), Expect = 0.49
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 342 LFISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKAGPE---IGVAS 398
L IS SGE+ + L + +++ I + S++AR +D++ IK E I +A
Sbjct: 52 LMISYSGESLELLNLIPHLKRLSHKIIAFTGSPNSSLARAADYVLDIKVEKEACPINLAP 111
Query: 399 TKAFTCQLLVLVIMAIYAGKVRGYINEE 426
T + T L + +A+ + R + E+
Sbjct: 112 TTSTTLTLALGDALAVALMRARNFSQED 139
>gnl|CDD|183089 PRK11337, PRK11337, DNA-binding transcriptional repressor RpiR;
Provisional.
Length = 292
Score = 32.0 bits (73), Expect = 0.49
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 342 LFISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFI 385
L +S SG T+D + ++ + G I + N S IA+ +D++
Sbjct: 192 LVVSHSGRTSDVIEAVELAKKNGAKIICITNSYHSPIAKLADYV 235
>gnl|CDD|182363 PRK10297, PRK10297, PTS system N,N'-diacetylchitobiose-specific
transporter subunit IIC; Provisional.
Length = 452
Score = 29.4 bits (66), Expect = 2.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Query: 543 IFITDEEGLKRQDFPSIETIVLPS-MGEIVSPIVFSLPIQM 582
IFI +R D+ + + LPS + +I PI+F LPI M
Sbjct: 317 IFIAS----RRADYRQVAKLALPSGIFQINEPILFGLPIIM 353
>gnl|CDD|181536 PRK08674, PRK08674, bifunctional phosphoglucose/phosphomannose
isomerase; Validated.
Length = 337
Score = 29.6 bits (67), Expect = 2.7
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 21/121 (17%)
Query: 252 MEKEIYEQPEAISRVLSHYINLSDHTIIPNIFNYDFANISGLLVSSCGTSYLAGLVGKFW 311
M +E PE L I+L D I +++S G S + G +
Sbjct: 4 MLEEYLNWPEQFEEALEIAISLD--------LEEDLEKIDNIVISGMGGSGIGGDL---- 51
Query: 312 FERLARLKVEIDVSSEFRYRD-----FVYSSKWASLFISQSGETADTLASLRYMRTQGLT 366
L ++++ V F RD FV K + +S SG T +TL+++ +G
Sbjct: 52 LRILLFDELKVPV---FVNRDYTLPAFV-DEKTLVIAVSYSGNTEETLSAVEQALKRGAK 107
Query: 367 I 367
I
Sbjct: 108 I 108
>gnl|CDD|148096 pfam06282, DUF1036, Protein of unknown function (DUF1036). This
family consists of several hypothetical bacterial
proteins of unknown function.
Length = 115
Score = 29.6 bits (67), Expect = 2.7
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 14/57 (24%)
Query: 462 KCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIAL-ITEGTFVIA 517
KC+TL+ EG LK YL+AE G G I + E F I
Sbjct: 40 KCETLI------------EGPLK-SRYYYLYAEDADGGGRWGGDIQFCVREDEFTIV 83
>gnl|CDD|184183 PRK13615, PRK13615, lipoprotein LpqB; Provisional.
Length = 557
Score = 29.2 bits (65), Expect = 2.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
Query: 177 PLIIGHGEGEMFVGSDVTALTLLTDKVTYME--------DGDWAIIRNS 217
PL++ G+ G VT L L +VT ++ DG A +RN+
Sbjct: 305 PLVLAQGQFGYLGGGTVTPLGTLGTRVTALQADAATLSADGRQAAVRNA 353
>gnl|CDD|150663 pfam10015, DUF2258, Uncharacterized protein conserved in archaea
(DUF2258). Members of this family of hypothetical
bacterial archaeal have no known function.
Length = 75
Score = 29.2 bits (66), Expect = 3.0
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 409 LVIMAIYAGKVRGYI-----NEEQERELIRSLVEIPRKMFDVLQN 448
LVI A YA K+R + + +E++R++ E+ +K+F+ L
Sbjct: 6 LVIAAGYADKLRRVLFAALSGKVPPKEIVRAISELNKKLFEKLVE 50
>gnl|CDD|163266 TIGR03440, unchr_TIGR03440, conserved hypothetical protein
TIGR03440. The model TIGR03438 describes a family of
uncharacteriaed putative methyltransferases in bacteria.
The family described here is a set of proteins also
restricted to bacteria, and located close to the member
of TIGR03438.
Length = 406
Score = 28.8 bits (65), Expect = 3.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 5/37 (13%)
Query: 230 ERPIQIVQIAPFLIGK-----GNYRHFMEKEIYEQPE 261
ERP V + PF I G Y F+E Y +PE
Sbjct: 192 ERPRHRVLVPPFEIDARPVTNGEYLEFIEDGGYRRPE 228
>gnl|CDD|132483 TIGR03442, TIGR03442, conserved hypothetical protein TIGR03442.
Members of this strictly bacterial protein family show
similarity to class II glutamine amidotransferases (see
Pfam family pfam00310). They are distinguished by
appearing in a genome context with, and usually adjacent
to or between, members of families TIGR03438 (an
uncharacterized methyltransferase) and TIGR03440 (an
uncharacterized protein).
Length = 251
Score = 28.9 bits (65), Expect = 4.3
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 69 IAHTRWATHGLPNKE-NSHPHCIEGIAVTHNGIIENF 104
+A R AT G+ E P +HNG ++NF
Sbjct: 86 LAAVRSATVGMAIDESACAPFSDGRWLFSHNGFVDNF 122
>gnl|CDD|182620 PRK10653, PRK10653, D-ribose transporter subunit RbsB; Provisional.
Length = 295
Score = 28.5 bits (64), Expect = 4.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 527 KTLSNIQEIVTRGGRVIFI--TDEEGL-------KRQDFPSIETIVLPSMGEIVSPI 574
K L+N+Q++ RG +++ I TD + + + + P I + GE+VS I
Sbjct: 70 KELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRGATKGEVVSHI 126
>gnl|CDD|163109 TIGR03023, WcaJ_sugtrans, Undecaprenyl-phosphate glucose
phosphotransferase. Colanic acid biosynthesis utilizes
a glucose-undecaprenyl carrier, knockout of EpsB
abolishes incorporation of UDP-glucose into the lipid
phase and the C-terminal portion of GumD has been shown
to be responsible for the glucosyl-1-transferase
activity.
Length = 451
Score = 28.3 bits (64), Expect = 5.4
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 11/58 (18%)
Query: 5 VGIVGRESVGERLFKALKRLEYRGY-------DSSGMATICDGKIQCVRAQGKLSELE 55
V IVG +G RL + L R GY D T G V GKL +LE
Sbjct: 131 VLIVGAGELGRRLAERLARNPELGYRVVGFFDDRPDARTGVRG----VPVLGKLDDLE 184
>gnl|CDD|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed.
Length = 304
Score = 28.5 bits (64), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 9 GRESVGERLFKALKRLEYRGYDSSGMATICDG 40
GRE + L L++LE GY++S AT G
Sbjct: 13 GRELFKKNLPDVLQKLEQAGYETSAHATTGPG 44
>gnl|CDD|151525 pfam11080, DUF2622, Protein of unknown function (DUF2622). This
family is conserved in the Enterobacteriaceae family.
Several members are named as YdiZ, a putative
cytoplasmic protein. The function is not known.
Length = 96
Score = 27.8 bits (62), Expect = 8.7
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
Query: 514 FVIAIAPYDRFFQKTLSNIQEI---VTRGGRVIFITDEEG 550
+V+ + +F + +L+ I E+ +TR G ++ +TDEEG
Sbjct: 9 YVVTV----KFHEDSLTEINELNNHLTRSGFLLTLTDEEG 44
Database: CddB
Posted date: Feb 4, 2011 9:54 PM
Number of letters in database: 5,994,473
Number of sequences in database: 21,608
Lambda K H
0.321 0.138 0.401
Gapped
Lambda K H
0.267 0.0677 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 9,944,508
Number of extensions: 661403
Number of successful extensions: 1470
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1410
Number of HSP's successfully gapped: 56
Length of query: 608
Length of database: 5,994,473
Length adjustment: 99
Effective length of query: 509
Effective length of database: 3,855,281
Effective search space: 1962338029
Effective search space used: 1962338029
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.0 bits)