Query gi|254780944|ref|YP_003065357.1| hypothetical protein CLIBASIA_04215 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 228 No_of_seqs 121 out of 807 Neff 6.4 Searched_HMMs 23785 Date Tue May 31 23:07:32 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780944.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3ksv_A Uncharacterized protein 72.8 2.1 8.6E-05 21.1 2.8 41 163-204 30-71 (149) 2 3o0m_A HIT family protein; ssg 67.5 3.9 0.00017 19.3 3.3 40 163-203 24-64 (149) 3 2eo4_A 150AA long hypothetical 65.9 3.5 0.00015 19.6 2.8 41 163-204 18-59 (149) 4 3lb5_A HIT-like protein involv 62.0 6 0.00025 18.2 3.3 39 163-202 47-86 (161) 5 1fit_A FragIle histidine prote 61.2 5.2 0.00022 18.6 2.9 41 163-204 18-59 (147) 6 1y23_A HIT, histidine triad pr 60.0 3.4 0.00014 19.7 1.8 39 163-202 24-63 (145) 7 3i24_A HIT family hydrolase; s 57.1 9 0.00038 17.1 3.6 42 164-207 20-62 (149) 8 3imi_A HIT family protein; str 56.8 7.3 0.00031 17.7 3.0 41 163-204 28-69 (147) 9 2oik_A Histidine triad (HIT) p 49.2 12 0.00049 16.5 3.1 40 163-203 25-65 (154) 10 1ems_A Nitfhit, NIT-fragIle hi 41.5 16 0.00067 15.6 3.0 41 163-204 314-355 (440) 11 3n1s_A HIT-like protein HINT; 40.8 8.1 0.00034 17.4 1.2 36 163-199 22-58 (119) 12 3nrd_A Histidine triad (HIT) p 40.2 17 0.0007 15.5 3.7 38 165-204 23-61 (135) 13 3o1c_A Histidine triad nucleot 33.0 17 0.00072 15.4 1.8 36 163-199 34-70 (126) 14 3oj7_A Putative histidine tria 30.6 16 0.00068 15.6 1.4 36 163-199 26-62 (117) 15 3i4s_A Histidine triad protein 27.9 27 0.0011 14.2 3.7 42 165-208 26-68 (149) 16 3hf7_A Uncharacterized CBS-dom 25.5 25 0.001 14.4 1.6 14 194-207 85-98 (130) 17 3op0_A Signal transduction pro 24.5 30 0.0012 14.0 1.9 54 92-150 218-275 (323) 18 1xqu_A HIT family hydrolase; p 22.1 17 0.00073 15.4 0.3 35 163-198 54-89 (147) No 1 >3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 1.90A {Leishmania major} Probab=72.83 E-value=2.1 Score=21.08 Aligned_cols=41 Identities=22% Similarity=0.437 Sum_probs=33.5 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 7738999970798532688999877762477-99999999998 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) +++.+.+|++..|. +-|.++.+|+..+..+ |++.||+..+. T Consensus 30 e~e~~~afld~~P~-~~GH~LViPk~H~~~l~~l~~~e~~~l~ 71 (149) T 3ksv_A 30 ETSKALAFMDINPL-SRGHMLVIPKEHASCLHELGMEDAADVG 71 (149) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCSSGGGSCHHHHHHHH T ss_pred ECCCEEEEECCCCC-CCCEEEECCCCCCCHHHHHHHHHHHHHH T ss_conf 89989999767889-9963896188774627888888999999 No 2 >3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} Probab=67.51 E-value=3.9 Score=19.34 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=32.3 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHH Q ss_conf 7738999970798532688999877762477-9999999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKM 203 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~ 203 (228) .++.+.+|++..|+ +-|.++++|+..+..+ |++.|+...+ T Consensus 24 e~e~~~~~~d~~P~-~~gH~LViPk~H~~~l~~l~~~e~~~l 64 (149) T 3o0m_A 24 EDENFLGILDIRPF-TRGHTLVIPKTHTVDLTDTPPETVAGM 64 (149) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCCSTTTSCHHHHHHH T ss_pred ECCCEEEEEECCCC-CCCEEEEEEEECCCCCCCCCHHHHHHH T ss_conf 78989999816899-984699998750331001118999999 No 3 >2eo4_A 150AA long hypothetical histidine triad nucleotide-binding protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} Probab=65.87 E-value=3.5 Score=19.62 Aligned_cols=41 Identities=10% Similarity=0.284 Sum_probs=32.9 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 7738999970798532688999877762477-99999999998 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) +++.+.+|++..|. +-|.++.+|+..+..+ |++.|+...+. T Consensus 18 e~e~~~a~~d~~P~-~~gH~LviPk~H~~~l~dl~~~e~~~l~ 59 (149) T 2eo4_A 18 EDEKFAAILDKYPV-SLGHTLVIPKKHFENYLEADEDTLAELA 59 (149) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCSSGGGSCHHHHHHHH T ss_pred ECCCEEEEECCCCC-CCEEEEEEEEECCCCHHHHHHHHHHHHH T ss_conf 89989999768989-9803999982266421333047899999 No 4 >3lb5_A HIT-like protein involved in cell-cycle regulation; niaid, seattle structural genomics center for infectious disease, ssgcid; 1.90A {Bartonella henselae} Probab=61.96 E-value=6 Score=18.22 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=32.0 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHH Q ss_conf 7738999970798532688999877762477-999999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAK 202 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k 202 (228) +++.+.+|++..|+ +-|.++.+|++.+..+ |++.|+.-. T Consensus 47 Ede~~~afld~~P~-~~GH~LViPk~H~~~l~~l~~~~~~~ 86 (161) T 3lb5_A 47 EDDDVIAFMDIMPQ-APGHTLVIPKKGSRNLLDADTETLFP 86 (161) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCSSTTTSCHHHHHH T ss_pred ECCCEEEEECCCCC-CCEEEEEEEEECCCCCCCCCHHHHHH T ss_conf 79979999788889-98569999744766600005788899 No 5 >1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Probab=61.23 E-value=5.2 Score=18.59 Aligned_cols=41 Identities=12% Similarity=0.353 Sum_probs=32.9 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 7738999970798532688999877762477-99999999998 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) .++.+.+|++..|. +-|.++++|+..+..+ |++-||...+. T Consensus 18 e~e~~~afld~~P~-~pGH~LviPkrH~~~l~dL~~~e~~~l~ 59 (147) T 1fit_A 18 KTELSFALVNRKPV-VPGHVLVCPLRPVERFHDLRPDEVADLF 59 (147) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCSSGGGSCHHHHHHHH T ss_pred ECCCEEEEECCCCC-CCCEEEEEECHHHHHHHHHHHHHHHHHH T ss_conf 88989999768789-9857999945466588887699999999 No 6 >1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 Probab=59.96 E-value=3.4 Score=19.75 Aligned_cols=39 Identities=15% Similarity=0.353 Sum_probs=31.5 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHH Q ss_conf 7738999970798532688999877762477-999999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAK 202 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k 202 (228) ++|.+.+|++..|+ +-|.++.+|+..+..+ |++.|+... T Consensus 24 e~e~~~a~~d~~P~-~~Gh~LViPk~H~~~~~~l~~~~~~~ 63 (145) T 1y23_A 24 EDEHVLAFLDISQV-TKGHTLVIPKTHIENVYEFTDELAKQ 63 (145) T ss_dssp ECSSEEEEECTTCS-STTCEEEEESSCCSSGGGCCHHHHHT T ss_pred ECCCEEEEECCCCC-CCCEEEEEEEECCCCHHHHHHHHHHH T ss_conf 78989999768889-98159999612578444411899999 No 7 >3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} Probab=57.09 E-value=9 Score=17.13 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=31.8 Q ss_pred CCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHHHHC Q ss_conf 738999970798532688999877762477-99999999998701 Q gi|254780944|r 164 EDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKMLISG 207 (228) Q Consensus 164 ~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~iiS~ 207 (228) +.++.+....+.+| |+++++|++.+..+ |++-|++.++.--. T Consensus 20 ~~~~~~l~~~~~~p--g~~Lv~pk~H~~~l~dL~~ee~~~l~~~~ 62 (149) T 3i24_A 20 PLCKVLLIKEDIGP--WLILVPRIEELKEIHHMTDEQQIQFIKES 62 (149) T ss_dssp SSEEEEEECBSSTT--EEEEEESCTTCSSGGGSCHHHHHHHHHHH T ss_pred CCEEEEEECCCCCC--EEEEEECCCCCCCHHHCCHHHHHHHHHHH T ss_conf 88299994189998--89998576687980539999999999999 No 8 >3imi_A HIT family protein; structural genomics, infectious diseases, center for structural genomics of infectious diseases, unknown function; 2.01A {Bacillus anthracis str} Probab=56.83 E-value=7.3 Score=17.70 Aligned_cols=41 Identities=15% Similarity=0.328 Sum_probs=33.2 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 7738999970798532688999877762477-99999999998 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) ..+.+.+|++..|. +-|.++.+|+..+..+ |++.++...+. T Consensus 28 e~~~~~a~~d~~P~-~~gH~LViPk~H~~~l~~l~~~~~~~l~ 69 (147) T 3imi_A 28 EDEHVLAFLDISQV-TKGHTLVIPKVHKQDIFALTPEIASHIF 69 (147) T ss_dssp ECSSEEEEECTTCS-STTCEEEEESSCCCSGGGCCHHHHHHHH T ss_pred ECCCEEEEECCCCC-CCCEEEEECCCCCCCHHHCCHHHHHHHH T ss_conf 78979999778889-9855999706566862348999999999 No 9 >2oik_A Histidine triad (HIT) protein; YP_546612.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus KT} SCOP: d.13.1.1 Probab=49.15 E-value=12 Score=16.46 Aligned_cols=40 Identities=8% Similarity=0.121 Sum_probs=32.2 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHH Q ss_conf 7738999970798532688999877762477-9999999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKM 203 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~ 203 (228) .++.+.||++-.|. +-|.++.+|+..+..+ |++.|+...+ T Consensus 25 e~~~~~v~l~~~p~-~pGh~LVipk~H~~~l~dL~~~e~~~l 65 (154) T 2oik_A 25 QDALCRVVHVENQD-YPGFCRVILNRHVKEMSDLRPAERDHL 65 (154) T ss_dssp ECSSEEEEECCCTT-CTTCEEEEESSCCSCGGGSCHHHHHHH T ss_pred ECCCEEEEECCCCC-CCEEEEEEECCCCCCHHHHHHHHHHHH T ss_conf 89979999817999-986999995020100766018899999 No 10 >1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 Probab=41.52 E-value=16 Score=15.61 Aligned_cols=41 Identities=22% Similarity=0.434 Sum_probs=33.8 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 7738999970798532688999877762477-99999999998 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) ..+++.+|+...|. .-|.++.+|+..+..+ |++.|++..+. T Consensus 314 e~~~~~a~~d~~p~-~~gh~lvipk~h~~~~~~l~~~~~~~~~ 355 (440) T 1ems_A 314 STPHSFVFVNLKPV-TDGHVLVSPKRVVPRLTDLTDAETADLF 355 (440) T ss_dssp ECSSEEEEECSSCS-STTCEEEEESSCCSCGGGSCHHHHHHHH T ss_pred ECCCEEEEECCCCC-CCCCCCCCCCCCCCCHHHCCHHHHHHHH T ss_conf 78967999789999-9996302785001991469999999999 No 11 >3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} PDB: 3n1t_A* Probab=40.78 E-value=8.1 Score=17.43 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=28.8 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHH Q ss_conf 7738999970798532688999877762477-999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAED 199 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsvee 199 (228) +++.+.||.+..|. +-|.++.+|++.+..+ |++.|| T Consensus 22 ed~~~~~f~d~~P~-~~gH~LViPk~H~~~~~~l~~~~ 58 (119) T 3n1s_A 22 QDDLVTAFRDISPQ-APTHILIIPNILIPTVNDVSAEH 58 (119) T ss_dssp ECSSEEEEECSSCS-SSEEEEEEESSCCCSGGGCCGGG T ss_pred ECCCEEEEECCCCC-CCCEEEEEECCCCCCCCCCCHHH T ss_conf 79979999817899-99139999643536412132343 No 12 >3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} Probab=40.15 E-value=17 Score=15.48 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=28.0 Q ss_pred CEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHH Q ss_conf 38999970798532688999877762477-99999999998 Q gi|254780944|r 165 DMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKML 204 (228) Q Consensus 165 ~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~i 204 (228) .+..++.+-+..| |+++..|+..+..+ |++.|++.++. T Consensus 23 ~~~~~l~~~~~~p--g~lLV~pk~H~~~l~dL~~ee~~~l~ 61 (135) T 3nrd_A 23 LCQMRLMNDRRWP--WLILVPQRADIKEVFELTPLDQAMLT 61 (135) T ss_dssp SEEEEEESCTTSC--EEEEEECCTTCCSGGGSCHHHHHHHH T ss_pred CEEEEEECCCCCC--EEEEEECCCCCCCHHHCCHHHHHHHH T ss_conf 7499983389999--89999573586980669999999999 No 13 >3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} PDB: 3llj_A* 1rzy_A* 3o1z_A 3o1x_A* 1kpe_B* 1kpb_A* 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A Probab=33.00 E-value=17 Score=15.43 Aligned_cols=36 Identities=14% Similarity=0.326 Sum_probs=28.7 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHH Q ss_conf 7738999970798532688999877762477-999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAED 199 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsvee 199 (228) ++|.+.+|+...|. +-|-++.+|++.+..+ |++-++ T Consensus 34 Ede~~~af~D~~P~-~~gH~LViPk~H~~~~~~l~~~~ 70 (126) T 3o1c_A 34 EDDQALAFHDISPQ-APTHFLVIPKKHISQISAAEDAD 70 (126) T ss_dssp ECSSEEEEECSSCS-SSEEEEEEESSCCCCGGGCCGGG T ss_pred ECCCEEEEECCCCC-CCCEEEEEECHHCCCCCCCCHHH T ss_conf 78969999767889-99629998241103643365577 No 14 >3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} PDB: 3omf_A* Probab=30.56 E-value=16 Score=15.55 Aligned_cols=36 Identities=17% Similarity=0.430 Sum_probs=27.9 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHH Q ss_conf 7738999970798532688999877762477-999999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAED 199 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsvee 199 (228) +++.+.+|+..-|. +-|-++.+|++.+..+ |++.|+ T Consensus 26 e~~~~~af~d~~P~-~~gH~LViPk~H~~~~~~l~~~~ 62 (117) T 3oj7_A 26 EDDEIFAFKDINPI-APIHILVIPKQHIASLNEITEEN 62 (117) T ss_dssp ECSSEEEEECSSCS-SSEEEEEEESSCCCSGGGCCTTT T ss_pred ECCCEEEEECCCCC-CCCEEEEEEEECCCCHHHHHHHH T ss_conf 68968999757999-98209999652459878870789 No 15 >3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} Probab=27.87 E-value=27 Score=14.24 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=28.6 Q ss_pred CEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHHHHHHHHHHCC Q ss_conf 38999970798532688999877762477-999999999987014 Q gi|254780944|r 165 DMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAEDSAKMLISGG 208 (228) Q Consensus 165 ~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsveeA~k~iiS~G 208 (228) .+....+.-..+| |.++.+|++.+..+ |++-|++.++.-... T Consensus 26 ~~~v~l~~d~~~P--G~~LVi~k~h~~~l~dL~~ee~~~l~~~v~ 68 (149) T 3i4s_A 26 LSKVLVIKDANYP--WLLLVPRRPDAVEIIDLDEVQQAQLMTEIS 68 (149) T ss_dssp SEEEEEESCTTSC--EEEEEECCTTCCSGGGSCHHHHHHHHHHHH T ss_pred CEEEEEECCCCCC--EEEEEECCCCCCCCHHCCHHHHHHHHHHHH T ss_conf 7089996489999--899994826969805299999999999999 No 16 >3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp} Probab=25.47 E-value=25 Score=14.43 Aligned_cols=14 Identities=0% Similarity=-0.142 Sum_probs=5.9 Q ss_pred CCCHHHHHHHHHHC Q ss_conf 99999999998701 Q gi|254780944|r 194 KMSAEDSAKMLISG 207 (228) Q Consensus 194 dmsveeA~k~iiS~ 207 (228) ++++++|++...-. T Consensus 85 ~~~l~~~l~~~~~~ 98 (130) T 3hf7_A 85 GTPLSTQLVKFQRN 98 (130) T ss_dssp TCBHHHHHHHHHHH T ss_pred CCCHHHHHHHHHHH T ss_conf 98989999999985 No 17 >3op0_A Signal transduction protein CBL-C; structural genomics, structural genomics consortium, SGC, SI transduction protein, SH3-binding protein; HET: PTR; 2.52A {Homo sapiens} Probab=24.53 E-value=30 Score=13.95 Aligned_cols=54 Identities=11% Similarity=0.259 Sum_probs=32.5 Q ss_pred HHHHHHHHHHCCHHHH--HHHHHHHHHHHHHCCCCCCCCEEEEEEC--CCCCEEEEEEEECCC Q ss_conf 9999999953323889--9999999999973177553310399984--887579999970687 Q gi|254780944|r 92 FFLSESILNNTPIVRH--LYKSTKQIIRTLLKEDSTSFKNACLVEY--PSAGFWSLCFLTTEV 150 (228) Q Consensus 92 ~~~~e~~l~rIP~v~~--IY~sikqi~~~~~~~~~~~f~~vVlVe~--P~~g~~~iGFvT~~~ 150 (228) ++-+..+..+.|+.-+ -|..+|+..+.+. ++-.+| +.++ -|.|.|+||+||.+. T Consensus 218 L~Nw~~lav~hpgy~aFLTydEvk~rLq~~~-~KpGsY----IfRlScTrlGqwAIgYVt~~g 275 (323) T 3op0_A 218 LKNWQLLAVNHPGYMAFLTYDEVQERLQACR-DKPGSY----IFRPSCTRLGQWAIGYVSSDG 275 (323) T ss_dssp HHHHHHHTTTCTTBCTTCCHHHHHHHTTGGG-GSTTEE----EEEECSSSTTCEEEEEECTTS T ss_pred HHCHHHHHHCCCHHEEEEEHHHHHHHHHHHC-CCCCCE----EEEECCCCCCCEEEEEECCCC T ss_conf 4244565423740214430899999999853-699708----997136766743799986888 No 18 >1xqu_A HIT family hydrolase; protein structure initiative, PSI, southeast collaboratory for structural genomics, secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 Probab=22.14 E-value=17 Score=15.37 Aligned_cols=35 Identities=9% Similarity=0.274 Sum_probs=27.2 Q ss_pred CCCEEEEEEECCCCCCCCEEEEEEHHHEEEC-CCCHH Q ss_conf 7738999970798532688999877762477-99999 Q gi|254780944|r 163 CEDMVTVFIPPTPLPTAGMLVFVPRNKVIML-KMSAE 198 (228) Q Consensus 163 ~~~~v~VfiPtsPnPtsG~~~~vp~~~v~~~-dmsve 198 (228) ++|.+.+|++..|. +.|-++.+|++.+..+ |++-+ T Consensus 54 Ede~~vaflD~~P~-~pgH~LViPK~H~~~l~dl~~~ 89 (147) T 1xqu_A 54 EDERVIAIKDINPA-APVHVLIIPKEHIANVKEINES 89 (147) T ss_dssp ECSSEEEEECSSCS-SSEEEEEEESSCCSSGGGCCTT T ss_pred ECCCEEEEEECCCC-CCEEEEEEECCCCCCHHHCCHH T ss_conf 68978999817999-9857999979528874443067 Done!