HHsearch alignment for GI: 254780945 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=92.12  E-value=1.1  Score=25.05  Aligned_cols=171  Identities=19%  Similarity=0.247  Sum_probs=105.0

Q ss_pred             CCCCEEE-EEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCE-EEEEECCC---CHHHHH
Q ss_conf             1343078-862144223699999973344430545886127999999998621101457865-89962464---225667
Q gi|254780945|r  291 KNRMLRI-LQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQII-VEIITGNM---PQAHRR  365 (700)
Q Consensus       291 ~~pM~RL-LQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~-v~lLtg~~---~~~er~  365 (700)
T Consensus        10 ~~~~~~i~v~Gp~GSGKTaLie~~~-~~L~~~~~~aVI~~-Di~t~~Da~~l~~~---~g~~i~~v~TG~~CH~da~m~~   84 (202)
T COG0378          10 NRPMLRIGVGGPPGSGKTALIEKTL-RALKDEYKIAVITG-DIYTKEDADRLRKL---PGEPIIGVETGKGCHLDASMNL   84 (202)
T ss_pred             CCCEEEEEECCCCCCCHHHHHHHHH-HHHHHHCCEEEEEC-EEECHHHHHHHHHC---CCCEEEEECCCCCCCCCHHHHH
T ss_conf             5864899961799867899999999-99975277689964-04006559999737---7980687403876588678899


Q ss_pred             HHHHHHCCC-C-CEEEEECH-----HHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHC-CC---CCCCEEECHHHHHHH
Q ss_conf             687762134-7-54864111-----2013345544441788521013356889987402-56---776101010132278
Q gi|254780945|r  366 KALERIAHG-Q-AHIIIGTH-----ALFQDSIQYYKLILVIVDEQHRFGVQQRLKLTQK-AT---APHVLLMTATPIPRT  434 (700)
Q Consensus       366 ~i~~~i~~G-~-~~iiIGTH-----AL~q~~v~F~~LgLvViDEQHRFGV~QR~~L~~K-g~---~ph~L~MtATPIPRT  434 (700)
T Consensus        85 ~ai~~l~~~~~~~Dll~iEs~GNL~~~~sp~L~-d~~~v~Vid------vteGe~~P~K~gP~i~~aDllVInK~D----  153 (202)
T COG0378          85 EAIEELVLDFPDLDLLFIESVGNLVCPFSPDLG-DHLRVVVID------VTEGEDIPRKGGPGIFKADLLVINKTD----  153 (202)
T ss_pred             HHHHHHHHCCCCCCEEEEECCCCEECCCCCCHH-HCEEEEEEE------CCCCCCCCCCCCCCEEEEEEEEEEHHH----
T ss_conf             999998631776778999237643244680413-046999998------788888765579964674189985677----


Q ss_pred             HHHHHHHCCCHHH----HCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH
Q ss_conf             9999752010111----10235576662079997020026899997631
Q gi|254780945|r  435 LVLTSLGDIDISK----ITEKPAGRKPIKTVIIPINRIDEVIERLKVVL  479 (700)
Q Consensus       435 Lal~~ygdldvS~----i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l  479 (700)
T Consensus       154 --La~~v~~dlevm~~da~~~np~~~ii~~n~ktg~G~~~~~~~i~~~~  200 (202)
T COG0378         154 --LAPYVGADLEVMARDAKEVNPEAPIIFTNLKTGEGLDEWLRFIEPQA  200 (202)
T ss_pred             --HHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf             --38772866999999999849999889984787868999999987640