HHsearch alignment for GI: 254780945 and conserved domain: COG5235
>COG5235 RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair].
Probab=95.52 E-value=0.083 Score=33.76 Aligned_cols=72 Identities=18% Similarity=0.270 Sum_probs=51.4
Q ss_pred CEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCHHHH---HHHCCCCCEEEEEEEEEECCCEEEEECCEEE
Q ss_conf 7899999998975421589833899998189369999951887899---8732898889999899731877999778689
Q gi|254780945|r 68 RIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRKTEML---KNVFFEGRKITVTGKIKKLKNRIIMVHPHYI 144 (700)
Q Consensus 68 ~~vti~g~V~~~~~~~~~~r~~~~v~v~D~tg~i~lvfFn~~~~yl---~k~lk~G~~v~vsGKv~~~~~~~qi~hPe~~ 144 (700)
T Consensus 67 ~~V~fVGvvrni~~~t----tn~~~~iEDGTG~Ievr~W~~~-~~~~e~~~d~~~~~yvkV~G~lk~F~GK~~I~~~~i~ 141 (258)
T COG5235 67 TNVQFVGVVRNIKTST----TNSMFVIEDGTGSIEVRFWPGN-SYEEEQCKDLEEQNYVKVNGSLKTFNGKRSISASHIS 141 (258)
T ss_pred EEEEEEEEEEEEEECC----CCEEEEEECCCCEEEEEECCCC-CHHHHHCCCCCCCCEEEEECCEEEECCEEEEEHHHEE
T ss_conf 6689999998401034----5418999348742898856887-2377754343326679994211220780577410052