HHsearch alignment for GI: 254780945 and conserved domain: COG5271
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].
Probab=93.17 E-value=0.7 Score=26.50 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=30.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
Q ss_conf 467988999999999841001343078862144223699
Q gi|254780945|r 271 FSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLV 309 (700)
Q Consensus 271 F~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiV 309 (700)
T Consensus 1830 ~~~l~sql~vlEsV~~cIn~nwPl--IlvG~t~~GKt~~ 1866 (4600)
T COG5271 1830 FVLLHSQLQVLESVMRCINMNWPL--ILVGDTGVGKTSL 1866 (4600)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCE--EEECCCCCCHHHH
T ss_conf 123554148999999998538977--9976888766899