HHsearch alignment for GI: 254780945 and conserved domain: COG5271

>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].
Probab=93.17  E-value=0.7  Score=26.50  Aligned_cols=37  Identities=30%  Similarity=0.460  Sum_probs=30.2

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
Q ss_conf             467988999999999841001343078862144223699
Q gi|254780945|r  271 FSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLV  309 (700)
Q Consensus       271 F~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiV  309 (700)
T Consensus      1830 ~~~l~sql~vlEsV~~cIn~nwPl--IlvG~t~~GKt~~ 1866 (4600)
T COG5271        1830 FVLLHSQLQVLESVMRCINMNWPL--ILVGDTGVGKTSL 1866 (4600)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCE--EEECCCCCCHHHH
T ss_conf             123554148999999998538977--9976888766899