HHsearch alignment for GI: 254780945 and conserved domain: KOG0331
>KOG0331 consensus.
Probab=99.77 E-value=5.5e-16 Score=144.98 Aligned_cols=336 Identities=22% Similarity=0.327 Sum_probs=230.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH---------HCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 6798899999999984100134307886214422369999997334443---------0545886127999999998621
Q gi|254780945|r 272 SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEA---------GGQAVIMAPIGILAQQHYEFIK 342 (700)
Q Consensus 272 ~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~---------G~Q~alMaPTEILA~QH~~~~~ 342 (700)
T Consensus 113 ~PtpIQaq~wp~~l~----GrD~--v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PTRELA~QV~~~~~ 186 (519)
T KOG0331 113 KPTPIQAQGWPIALS----GRDL--VGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPTRELAVQVQAEAR 186 (519)
T ss_pred CCCHHHHCCCCEECC----CCCE--EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHH
T ss_conf 885344144651126----8865--7782357862055555799998700444347999869997685999999999999
Q ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHC-----CCCCCCCCCCEEEECCCCC-----CCHHHHH
Q ss_conf 10145786589962464225667687762134754864111201-----3345544441788521013-----3568899
Q gi|254780945|r 343 KYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALF-----QDSIQYYKLILVIVDEQHR-----FGVQQRL 412 (700)
Q Consensus 343 ~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~-----q~~v~F~~LgLvViDEQHR-----FGV~QR~ 412 (700)
T Consensus 187 ~~~~~~~~~~~cvyGG~~~~---~Q~~~l~~g-vdiviaTPGRl~d~le~g~~~l~~v~ylVLDEADrMldmGFe~-qI~ 261 (519)
T KOG0331 187 EFGKSLRLRSTCVYGGAPKG---PQLRDLERG-VDVVIATPGRLIDLLEEGSLNLSRVTYLVLDEADRMLDMGFEP-QIR 261 (519)
T ss_pred HHCCCCCCCEEEEECCCCCC---HHHHHHHCC-CCEEEECCHHHHHHHHCCCCCCCCEEEEEECCHHHHHCCCCHH-HHH
T ss_conf 97077774079986898863---788987559-8189807717899997488564530399963477663135379-999
Q ss_pred HHHHCCCCCC-CEEE-CHHHHHH---HHHHHHHHC-CCHHHH--CCCCCCCCCCEEEEEEC---CCHHHHHHHHHHHH-C
Q ss_conf 8740256776-1010-1013227---899997520-101111--02355766620799970---20026899997631-0
Q gi|254780945|r 413 KLTQKATAPH-VLLM-TATPIPR---TLVLTSLGD-IDISKI--TEKPAGRKPIKTVIIPI---NRIDEVIERLKVVL-S 480 (700)
Q Consensus 413 ~L~~Kg~~ph-~L~M-tATPIPR---TLal~~ygd-ldvS~i--~e~P~gR~~I~T~~~~~---~~~~~~~~~i~~~l-~ 480 (700)
T Consensus 262 ~Il~~i~~~~rQtlm~saT-wp~~v~~lA~~fl~~~~~i~ig~~~~~~a-~~~i~qive~~~~~~K~~~l~~lL~~~~~~ 339 (519)
T KOG0331 262 KILSQIPRPDRQTLMFSAT-WPKEVRQLAEDFLNNPIQINVGNKKELKA-NHNIRQIVEVCDETAKLRKLGKLLEDISSD 339 (519)
T ss_pred HHHHHCCCCCCCEEEEEEE-CCHHHHHHHHHHHCCCEEEEECCHHHHHH-HCCHHHHHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf 9987558975227888654-64889999999845964899612145544-333146511268788988799999997356
Q ss_pred CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCC
Q ss_conf 38738999712012211121014666666686637103120146998999999999755986999980034104688876
Q gi|254780945|r 481 EGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDA 560 (700)
Q Consensus 481 ~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna 560 (700)
T Consensus 340 ~~~KvIIFc~tk--------r~~~~l~~~l~~~-~~~a~~iHGd~sQ~eR~~~L~~FreG~~~vLVATdVAaRGLDi~dV 410 (519)
T KOG0331 340 SEGKVIIFCETK--------RTCDELARNLRRK-GWPAVAIHGDKSQSERDWVLKGFREGKSPVLVATDVAARGLDVPDV 410 (519)
T ss_pred CCCCEEEEECCH--------HHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 898689996433--------6499999887751-7661550066648899999975026885469881531256887666
Q ss_pred CEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHCCC
Q ss_conf 5899858525474688773011667898359999708889987999999998414---258999999852063
Q gi|254780945|r 561 SIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTE---DGFLIAEEDLKQRKE 630 (700)
Q Consensus 561 ~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~---dGf~iAe~Dl~lRG~ 630 (700)
T Consensus 411 ~lVInydfP~~vEdYVHR-iGRTGRa~~~G~A~tfft~~~~~~a~~l~~~l~e~~q~v~~~l~~~~~~~~~~~ 482 (519)
T KOG0331 411 DLVINYDFPNNVEDYVHR-IGRTGRAGKKGTAITFFTSDNAKLARELIKVLREAGQTVPPDLLEYARVSGSGG 482 (519)
T ss_pred CEEEECCCCCCHHHHHHH-CCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
T ss_conf 479967899998998865-376545788824899972788777899999999706878747888876204687