HHsearch alignment for GI: 254780945 and conserved domain: KOG0332
>KOG0332 consensus.
Probab=99.46 E-value=4.3e-11 Score=106.55 Aligned_cols=313 Identities=22% Similarity=0.328 Sum_probs=186.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH---HCCEEEEEHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98899999999984100134307886214422369999997334443---054588612799999999862110145786
Q gi|254780945|r 274 TKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEA---GGQAVIMAPIGILAQQHYEFIKKYTQNTQI 350 (700)
Q Consensus 274 T~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~---G~Q~alMaPTEILA~QH~~~~~~~~~~~~i 350 (700)
T Consensus 114 skIQe~aLPlll~----~Pp~nlIaQsqsGtGKTaaFvL~MLsRvd~~~~~PQ~iCLaPtrELA~Q~~eVv~eMGKf~~i 189 (477)
T KOG0332 114 SKIQETALPLLLA----EPPQNLIAQSQSGTGKTAAFVLTMLSRVDPDVVVPQCICLAPTRELAPQTGEVVEEMGKFTEL 189 (477)
T ss_pred CHHHHHHCCHHHC----CCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEE
T ss_conf 2577752125305----982656655017886058999999873483335877405476177799898999984670114
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCC------CCCCCCCCEEEECCC------CCCCHHHHHHHH-HC
Q ss_conf 58996246422566768776213475486411120133------455444417885210------133568899874-02
Q gi|254780945|r 351 IVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQD------SIQYYKLILVIVDEQ------HRFGVQQRLKLT-QK 417 (700)
Q Consensus 351 ~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~------~v~F~~LgLvViDEQ------HRFGV~QR~~L~-~K 417 (700)
T Consensus 190 ta~yair~sk~~rG~~l~-------eqIviGTPGtv~Dl~~klk~id~~kikvfVlDEAD~Mi~tqG~~-D~S~rI~~~l 261 (477)
T KOG0332 190 TASYAIRGSKAKRGNKLT-------EQIVIGTPGTVLDLMLKLKCIDLEKIKVFVLDEADVMIDTQGFQ-DQSIRIMRSL 261 (477)
T ss_pred EEEEEECCCCCCCCCCCH-------HHEEECCCCCHHHHHHHHHHHCHHHCEEEEECCHHHHHHCCCCC-CCCHHHHHHC
T ss_conf 689985376444677332-------22131799428999999874276664388853225554313665-5431044316
Q ss_pred CCCCCCEEECHHHHHHHHHHHH--HHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH---HHCCCCEEEEEECCC
Q ss_conf 5677610101013227899997--52010111102355766620799970200268999976---310387389997120
Q gi|254780945|r 418 ATAPHVLLMTATPIPRTLVLTS--LGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKV---VLSEGKKAYWICPQI 492 (700)
Q Consensus 418 g~~ph~L~MtATPIPRTLal~~--ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~---~l~~g~q~y~VcPlI 492 (700)
T Consensus 262 P~~~QllLFSATf~e~V~~Fa~kivpn~n~i~Lk~eel~L~~IkQlyv~C~~~~~K~~~l~~lyg~~tig-qsiIFc~t- 339 (477)
T KOG0332 262 PRNQQLLLFSATFVEKVAAFALKIVPNANVIILKREELALDNIKQLYVLCACRDDKYQALVNLYGLLTIG-QSIIFCHT- 339 (477)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHHHEEECCCHHHHHHHHHHHHHHHHHH-HEEEEEEE-
T ss_conf 8762377640103779999999854898403656343064213431366555166799999987011110-05899962-
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECH----
Q ss_conf 1221112101466666668663710312014699899999999975598699998003410468887658998585----
Q gi|254780945|r 493 EEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENA---- 568 (700)
Q Consensus 493 eese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~a---- 568 (700)
T Consensus 340 -------k~ta~~l~~~m~~~-Gh~V~~l~G~l~~~~R~~ii~~Fr~g~~kVLitTnV~ARGiDv~qVs~VvNydlP~~~ 411 (477)
T KOG0332 340 -------KATAMWLYEEMRAE-GHQVSLLHGDLTVEQRAAIIDRFREGKEKVLITTNVCARGIDVAQVSVVVNYDLPVKY 411 (477)
T ss_pred -------HHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCEEEEEEECCCCCCC
T ss_conf -------02699999999843-7536785065306788999999865760699870111235653137999944776455
Q ss_pred -HHCC-HHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf -2547-4688773011667898359999708889987999999998
Q gi|254780945|r 569 -EHFG-LAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLK 612 (700)
Q Consensus 569 -erfG-LsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~ 612 (700)
T Consensus 412 ~~~pD~etYlHRi-GRtGRFGkkG~a~n~v~~~~s---~~~mn~iq 453 (477)
T KOG0332 412 TGEPDYETYLHRI-GRTGRFGKKGLAINLVDDKDS---MNIMNKIQ 453 (477)
T ss_pred CCCCCHHHHHHHH-CCCCCCCCCCEEEEEECCCCC---HHHHHHHH
T ss_conf 7898778898870-234656655248986416575---89999999