HHsearch alignment for GI: 254780945 and conserved domain: KOG0342

>KOG0342 consensus.
Probab=99.70  E-value=8.9e-15  Score=135.47  Aligned_cols=314  Identities=21%  Similarity=0.304  Sum_probs=228.1

Q ss_pred             HHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH-------HHHCCEEEEEHHHH
Q ss_conf             89999863024-67988999999999841001343078862144223699999973344-------43054588612799
Q gi|254780945|r  261 IAQKILRNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV-------EAGGQAVIMAPIGI  332 (700)
Q Consensus       261 ~~~~f~~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~-------~~G~Q~alMaPTEI  332 (700)
T Consensus        92 ~t~kAi~~~GF~~MT~VQ~~ti~pll~g----k--Dvl~~AKTGtGKTlAFLiPaie~l~k~~~~~r~~~~vlIi~PTRE  165 (543)
T KOG0342          92 LTLKAIKEMGFETMTPVQQKTIPPLLEG----K--DVLAAAKTGTGKTLAFLLPAIELLRKLKFKPRNGTGVLIICPTRE  165 (543)
T ss_pred             HHHHHHHHCCCCCCHHHHHHHCCCCCCC----C--CCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCHH
T ss_conf             8887887358530028887426766798----4--312451268874101046899999853657778714899656289


Q ss_pred             HHHHHHHHHHHHCCCC-CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHC----C--CCCCCCCCCEEEECCCCC
Q ss_conf             9999998621101457-86589962464225667687762134754864111201----3--345544441788521013
Q gi|254780945|r  333 LAQQHYEFIKKYTQNT-QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALF----Q--DSIQYYKLILVIVDEQHR  405 (700)
Q Consensus       333 LA~QH~~~~~~~~~~~-~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~----q--~~v~F~~LgLvViDEQHR  405 (700)
T Consensus       166 LA~Q~~~eak~Ll~~h~~~~v~~viGG~~~---~~e~~kl~k-~~niliATPGRLlDHlqNt~~f~~r~~k~lvlDEADr  241 (543)
T KOG0342         166 LAMQIFAEAKELLKYHESITVGIVIGGNNF---SVEADKLVK-GCNILIATPGRLLDHLQNTSGFLFRNLKCLVLDEADR  241 (543)
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEECCCCC---HHHHHHHHC-CCCEEEECCCHHHHHHHCCCCCHHHCCCEEEEECCHH
T ss_conf             999899999999972767734787677410---589997515-5527886784177676557841221220357502035


Q ss_pred             C-------CHHHHHHHHHCCCCCCCEEECHHHHHH--HHHHHHHHCCCHHHHCCCCCCCCCCE-----EEEEECCC--HH
Q ss_conf             3-------568899874025677610101013227--89999752010111102355766620-----79997020--02
Q gi|254780945|r  406 F-------GVQQRLKLTQKATAPHVLLMTATPIPR--TLVLTSLGDIDISKITEKPAGRKPIK-----TVIIPINR--ID  469 (700)
Q Consensus       406 F-------GV~QR~~L~~Kg~~ph~L~MtATPIPR--TLal~~ygdldvS~i~e~P~gR~~I~-----T~~~~~~~--~~  469 (700)
T Consensus       242 lLd~GF~~di~~Ii~~lp--k~rqt~LFSAT~~~kV~~l~~~~L~~-d~~~v~~~d~~~~~The~l~Qgyvv~~~~~~f~  318 (543)
T KOG0342         242 LLDIGFEEDVEQIIKILP--KQRQTLLFSATQPSKVKDLARGALKR-DPVFVNVDDGGERETHERLEQGYVVAPSDSRFS  318 (543)
T ss_pred             HHHCCCHHHHHHHHHHCC--CCCCEEEEECCCCHHHHHHHHHHHCC-CCEEEECCCCCCCCHHHCCCCEEEECCCCCHHH
T ss_conf             665251888999987523--55304676478968899999876337-746862478997302324664079626541179


Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECH
Q ss_conf             68999976310387389997120122111210146666666866371031201469989999999997559869999800
Q gi|254780945|r  470 EVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATT  549 (700)
Q Consensus       470 ~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTt  549 (700)
T Consensus       319 ll~~~LKk~~~~-~KiiVF~sT~---------~~vk~~~~lL~~~dlpv~eiHgk~~Q~kRT~~~~~F~kaesgIL~cTD  388 (543)
T KOG0342         319 LLYTFLKKNIKR-YKIIVFFSTC---------MSVKFHAELLNYIDLPVLEIHGKQKQNKRTSTFFEFCKAESGILVCTD  388 (543)
T ss_pred             HHHHHHHHHCCC-CEEEEEECHH---------HHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf             999999973477-2499993302---------679999999850687532442578532202389988610664399603


Q ss_pred             HHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf             3410468887658998585254746887730116678983599997088
Q gi|254780945|r  550 VIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHP  598 (700)
Q Consensus       550 viEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~  598 (700)
T Consensus       389 VaARGlD~P~V~~VvQ~~~P~d~~~YIHRv-GRTaR~gk~G~alL~l~p  436 (543)
T KOG0342         389 VAARGLDIPDVDWVVQYDPPSDPEQYIHRV-GRTAREGKEGKALLLLAP  436 (543)
T ss_pred             HHHCCCCCCCCEEEEEECCCCCHHHHHHHH-CCCCCCCCCCEEEEEECH
T ss_conf             221368888840799858999989989873-212236898638999676