HHsearch alignment for GI: 254780945 and conserved domain: KOG0348
>KOG0348 consensus.
Probab=99.70 E-value=6.7e-15 Score=136.45 Aligned_cols=350 Identities=23% Similarity=0.371 Sum_probs=215.8
Q ss_pred CCHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH---------HHCCEEEE
Q ss_conf 75789999863024-679889999999998410013430788621442236999999733444---------30545886
Q gi|254780945|r 258 EGKIAQKILRNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE---------AGGQAVIM 327 (700)
Q Consensus 258 ~~~~~~~f~~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~---------~G~Q~alM 327 (700)
T Consensus 144 ~~~lv~~L~~~m~i~~pTsVQkq~IP~lL~g--r----D~lV~aQTGSGKTLAYllPiVq~Lq~m~~ki~Rs~G~~ALVi 217 (708)
T KOG0348 144 HPHLVSHLNTKMKISAPTSVQKQAIPVLLEG--R----DALVRAQTGSGKTLAYLLPIVQSLQAMEPKIQRSDGPYALVI 217 (708)
T ss_pred CHHHHHHHHHHHCCCCCCHHHHCCHHHHHCC--C----CEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
T ss_conf 7799999988745576406765020355258--6----347885778862179999999999726865555688348998
Q ss_pred EHHHHHHHHHHHHHHHHCCCCC--CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC------HHHCCCCCCCCCCCEEE
Q ss_conf 1279999999986211014578--658996246422566768776213475486411------12013345544441788
Q gi|254780945|r 328 APIGILAQQHYEFIKKYTQNTQ--IIVEIITGNMPQAHRRKALERIAHGQAHIIIGT------HALFQDSIQYYKLILVI 399 (700)
Q Consensus 328 aPTEILA~QH~~~~~~~~~~~~--i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGT------HAL~q~~v~F~~LgLvV 399 (700)
T Consensus 218 vPTREL~~Q~y~~~qKLl~~~hWIVPg~lmGGEkkKSEKARLRK----G-iNILIgTPGRLvDHLknT~~i~~s~LRwlV 292 (708)
T KOG0348 218 VPTRELALQIYETVQKLLKPFHWIVPGVLMGGEKKKSEKARLRK----G-INILIGTPGRLVDHLKNTKSIKFSRLRWLV 292 (708)
T ss_pred ECHHHHHHHHHHHHHHHHCCCEEEEECEEECCCCCCCHHHHHHC----C-CEEEECCCHHHHHHHHCCCHHEEEEEEEEE
T ss_conf 04199999999999987257437730212236331017888754----8-548975842788987430022100356898
Q ss_pred ECCCCCC-----C--HHHHHHHHHCCC--------CCCC---EEECHHHHH---HHHHHHH----HHCCCHHHHCCC---
Q ss_conf 5210133-----5--688998740256--------7761---010101322---7899997----520101111023---
Q gi|254780945|r 400 VDEQHRF-----G--VQQRLKLTQKAT--------APHV---LLMTATPIP---RTLVLTS----LGDIDISKITEK--- 451 (700)
Q Consensus 400 iDEQHRF-----G--V~QR~~L~~Kg~--------~ph~---L~MtATPIP---RTLal~~----ygdldvS~i~e~--- 451 (700)
T Consensus 293 lDEaDrlleLGfekdit~Il~~v~~~~~~e~~~~~lp~q~q~mLlSATLtd~V~rLa~~sLkDpv~I~ld~s~~~~~p~~ 372 (708)
T KOG0348 293 LDEADRLLELGFEKDITQILKAVHSIQNAECKDPKLPHQLQNMLLSATLTDGVNRLADLSLKDPVYISLDKSHSQLNPKD 372 (708)
T ss_pred ECCHHHHHHCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCH
T ss_conf 53436787624300399999987500200102556637877676665567778887633156855640430122038631
Q ss_pred ---------CCCCCCCEEE-----------EEECC-CHHHHHHHHHHHHCCC-CE---EEEEEC-CCCC-----CCCCCC
Q ss_conf ---------5576662079-----------99702-0026899997631038-73---899971-2012-----211121
Q gi|254780945|r 452 ---------PAGRKPIKTV-----------IIPIN-RIDEVIERLKVVLSEG-KK---AYWICP-QIEE-----KKESNF 500 (700)
Q Consensus 452 ---------P~gR~~I~T~-----------~~~~~-~~~~~~~~i~~~l~~g-~q---~y~VcP-lIee-----se~~~~ 500 (700)
T Consensus 373 ~a~~ev~~~~~~~-~l~~~~iPeqL~qry~vVPpKLRLV~Laa~L~~~~k~~~~qk~iVF~S~~d~VeFHy~lf~~~l~~ 451 (708)
T KOG0348 373 KAVQEVDDGPAGD-KLDSFAIPEQLLQRYTVVPPKLRLVALAALLLNKVKFEEKQKMIVFFSCSDSVEFHYSLFSEALLS 451 (708)
T ss_pred HHHHHCCCCCCCC-CCCCCCCCHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHC
T ss_conf 4566337753456-320123868765006852874108999999999865444230699996325789999999865402
Q ss_pred ----CHHHHHHHHHHHHCCC-CEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHH
Q ss_conf ----0146666666866371-03120146998999999999755986999980034104688876589985852547468
Q gi|254780945|r 501 ----RSVVERFNSLHEHFTS-SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQ 575 (700)
Q Consensus 501 ----~~~~~~~~~l~~~~~~-~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsq 575 (700)
T Consensus 452 ~~e~~s~~~~s~g~~~l~~~~k~~rLHGsm~QeeRts~f~~Fs~~~~~VLLcTDVAaRGLDlP~V~~vVQYd~P~s~ady 531 (708)
T KOG0348 452 HLEGSSGAPDSEGLPPLFMDLKFYRLHGSMEQEERTSVFQEFSHSRRAVLLCTDVAARGLDLPHVGLVVQYDPPFSTADY 531 (708)
T ss_pred CCCCCCCCCCCCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCCCEEEEECCCCCHHHH
T ss_conf 32366678666798103314637884274348899999875303544278850345426888776769982799988999
Q ss_pred HHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 877301166789835999970888998799999999841425899999985
Q gi|254780945|r 576 LHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEEDLK 626 (700)
Q Consensus 576 LHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~dGf~iAe~Dl~ 626 (700)
T Consensus 532 lHR-vGRTARaG~kG~alLfL~P~--Ea--ey~~~l~~~~~~--l~q~~~~ 575 (708)
T KOG0348 532 LHR-VGRTARAGEKGEALLFLLPS--EA--EYVNYLKKHHIM--LLQFDME 575 (708)
T ss_pred HHH-HHHHHHCCCCCCEEEEECCC--HH--HHHHHHHHHCCH--HHCCCHH
T ss_conf 998-40454346777157886651--79--999988750223--4326366