HHsearch alignment for GI: 254780945 and conserved domain: KOG0351

>KOG0351 consensus.
Probab=99.40  E-value=6.3e-10  Score=97.42  Aligned_cols=319  Identities=24%  Similarity=0.322  Sum_probs=211.7

Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             79889999999998410013430788621442236999999733444305458861279999999986211014578658
Q gi|254780945|r  273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIV  352 (700)
Q Consensus       273 LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v  352 (700)
T Consensus       265 FR~~Q~eaI~~~l~---Gkd~f---vlmpTG~GKSLCYQlP---A~l~~gitvVISPL~SLm~DQ---v~~L-~~~~I~a  331 (941)
T KOG0351         265 FRPNQLEAINATLS---GKDCF---VLMPTGGGKSLCYQLP---ALLLGGVTVVISPLISLMQDQ---VTHL-SKKGIPA  331 (941)
T ss_pred             CCHHHHHHHHHHHC---CCCEE---EEEECCCCEEEEEECC---CCCCCCCEEEECCHHHHHHHH---HHHH-HHCCCCE
T ss_conf             88439999999974---88469---9953488625676666---101389369963389999999---9743-2148541


Q ss_pred             EEEECCCCHHHHHHHHHHHCCC--CCEEEEECH-------HHCCCCCCCCC---CCEEEECCCCC---CCHHHH-----H
Q ss_conf             9962464225667687762134--754864111-------20133455444---41788521013---356889-----9
Q gi|254780945|r  353 EIITGNMPQAHRRKALERIAHG--QAHIIIGTH-------ALFQDSIQYYK---LILVIVDEQHR---FGVQQR-----L  412 (700)
Q Consensus       353 ~lLtg~~~~~er~~i~~~i~~G--~~~iiIGTH-------AL~q~~v~F~~---LgLvViDEQHR---FGV~QR-----~  412 (700)
T Consensus       332 ~~L~s~q~~~~~~~i~q~l~~~~~~ikilYvtPE~v~~~~~l~~~~~~L~~~~~lal~vIDEAHCVSqWgHdFRp~Yk~l  411 (941)
T KOG0351         332 CFLSSIQTAAERLAILQKLANGNPIIKILYVTPEKVVASEGLLESLADLYARGLLALFVIDEAHCVSQWGHDFRPSYKRL  411 (941)
T ss_pred             EECCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCCCHHHHHH
T ss_conf             32356566888999999985788767899967788633321566787506787048887227887664223334778999


Q ss_pred             -HHHHCCCCCCCEEECHHHHHHHH--HHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH-HHCCCCEEEEE
Q ss_conf             -87402567761010101322789--999752010111102355766620799970200268999976-31038738999
Q gi|254780945|r  413 -KLTQKATAPHVLLMTATPIPRTL--VLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKV-VLSEGKKAYWI  488 (700)
Q Consensus       413 -~L~~Kg~~ph~L~MtATPIPRTL--al~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~-~l~~g~q~y~V  488 (700)
T Consensus       412 ~~l~~~~~~vP~iALTATAT~~v~~DIi~~L~l~~~~~~~~s-fnR~NL~yeV~~k~~~~~~~~~~~~~~~~~~~~s~II  490 (941)
T KOG0351         412 GLLRIRFPGVPFIALTATATERVREDVIRSLGLRNPELFKSS-FNRPNLKYEVSPKTDKDALLDILEESKLRHPDQSGII  490 (941)
T ss_pred             HHHHHHCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCEECCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf             999852789976875300208899999998278886322256-7998855999856675316889887651289998379


Q ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECH
Q ss_conf             71201221112101466666668663710312014699899999999975598699998003410468887658998585
Q gi|254780945|r  489 CPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENA  568 (700)
Q Consensus       489 cPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~a  568 (700)
T Consensus       491 YC~---s----r~~ce~vs~~L~~~-~~~a~~YHAGl~~~~R~~Vq~~w~~~~~~VivATVAFGMGIdK~DVR~ViH---  559 (941)
T KOG0351         491 YCL---S----RKECEQVSAVLRSL-GKSAAFYHAGLPPKERETVQKAWMSDKIRVIVATVAFGMGIDKPDVRFVIH---  559 (941)
T ss_pred             EEC---C----CCHHHHHHHHHHHH-CHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEE---
T ss_conf             968---8----23199999999873-520575526788788899999985688708999852247877786359997---


Q ss_pred             HHCCHHH----HHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC-HHHHHHH
Q ss_conf             2547468----8773011667898359999708889987999999998414-2589999
Q gi|254780945|r  569 EHFGLAQ----LHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTE-DGFLIAE  622 (700)
Q Consensus       569 erfGLsq----LHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~-dGf~iAe  622 (700)
T Consensus       560 --~~lPks~E~YYQE~GRAGRDG~~s~C~l~y~~~----D~~~l~~ll~s~~~~~~~~~  612 (941)
T KOG0351         560 --YSLPKSFEGYYQEAGRAGRDGLPSSCVLLYGYA----DISELRRLLTSGNRLSGVKK  612 (941)
T ss_pred             --CCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHH----HHHHHHHHHHCCCCCCCHHH
T ss_conf             --778614788887403367678800267742613----78999999872653101121