HHsearch alignment for GI: 254780945 and conserved domain: KOG0352

>KOG0352 consensus.
Probab=99.19  E-value=1.8e-08  Score=85.99  Aligned_cols=313  Identities=21%  Similarity=0.287  Sum_probs=197.8

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf             98899999999984100134307886214422369999997334443054588612799999999862110145786589
Q gi|254780945|r  274 TKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVE  353 (700)
Q Consensus       274 T~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~  353 (700)
T Consensus        22 s~LQE~A~~c~VK~k~DV-----yVsMPTGaGKSLCyQLPaL~---~~gITIV~SPLiALIkDQiDHL~~----LKVp~~   89 (641)
T KOG0352          22 SRLQEQAINCIVKRKCDV-----YVSMPTGAGKSLCYQLPALV---HGGITIVISPLIALIKDQIDHLKR----LKVPCE   89 (641)
T ss_pred             CHHHHHHHHHHHHCCCCE-----EEECCCCCCHHHHHHCHHHH---HCCEEEEECHHHHHHHHHHHHHHH----HCCCHH
T ss_conf             757899899988346737-----99646887601454265877---288189930789999999877874----056166


Q ss_pred             EEECCCCHHHHHHHHHHHCCCCCE--EEEEC---------HHHCCCCCCCCCCCEEEECCCCCCCHHHH-----------
Q ss_conf             962464225667687762134754--86411---------12013345544441788521013356889-----------
Q gi|254780945|r  354 IITGNMPQAHRRKALERIAHGQAH--IIIGT---------HALFQDSIQYYKLILVIVDEQHRFGVQQR-----------  411 (700)
Q Consensus       354 lLtg~~~~~er~~i~~~i~~G~~~--iiIGT---------HAL~q~~v~F~~LgLvViDEQHRFGV~QR-----------  411 (700)
T Consensus        90 SLNSKlSt~ER~ri~~DL~~ekp~~K~LYITPE~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHC--VSQWGHDFRPDYL~L  167 (641)
T KOG0352          90 SLNSKLSTVERSRIMGDLAKEKPTIKMLYITPEGAATDGFQKLLNGLANRDVLRYIVVDEAHC--VSQWGHDFRPDYLTL  167 (641)
T ss_pred             HHHCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHH--HHHHCCCCCCCHHHH
T ss_conf             640121078899998888743775148997631555666899999887414022477334666--776266668204446


Q ss_pred             HHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEE----------------CCCHHHHHHHH
Q ss_conf             98740256776101010132278999975201011110235576662079997----------------02002689999
Q gi|254780945|r  412 LKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIP----------------INRIDEVIERL  475 (700)
Q Consensus       412 ~~L~~Kg~~ph~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~----------------~~~~~~~~~~i  475 (700)
T Consensus       168 G~LRS~~~~vpwvALTATA~~~VqED-i~~qL~L---------~~PVAiFkTP~FR~NLFYD~~~K~~I~D~~~~LaDF~  237 (641)
T KOG0352         168 GSLRSVCPGVPWVALTATANAKVQED-IAFQLKL---------RNPVAIFKTPTFRDNLFYDNHMKSFITDCLTVLADFS  237 (641)
T ss_pred             HHHHHHCCCCCEEEEECCCCHHHHHH-HHHHHHC---------CCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf             66774469996698543467767799-9999760---------5854440574145444578888876413777899999


Q ss_pred             HHHHCC---------CC-EEEEE-ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf             763103---------87-38999-71201221112101466666668663710312014699899999999975598699
Q gi|254780945|r  476 KVVLSE---------GK-KAYWI-CPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKL  544 (700)
Q Consensus       476 ~~~l~~---------g~-q~y~V-cPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~i  544 (700)
T Consensus       238 ~~~LG~~~~~~~~~K~~~GCGIVYCRTR~~cE--------q~AI~l~-~~Gi~A~AYHAGLK~~ERTeVQe~WM~~~~Pv  308 (641)
T KOG0352         238 SSNLGKHEKASQNKKTFTGCGIVYCRTRNECE--------QVAIMLE-IAGIPAMAYHAGLKKKERTEVQEKWMNNEIPV  308 (641)
T ss_pred             HHHCCCCHHHHCCCCCCCCCEEEEECCHHHHH--------HHHHHHH-HCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCE
T ss_conf             98628904441178777773279960288999--------8988753-24762677650014112688999986278877


Q ss_pred             EEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf             99800341046888765899858525474688773011667898359999708889987999999998414258999999
Q gi|254780945|r  545 LIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEED  624 (700)
Q Consensus       545 LvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~dGf~iAe~D  624 (700)
T Consensus       309 I~AT~SFGMGVDKp~VRFViHW~-~~qn~AgYYQESGRAGRDGk~SyCRLYYsR~-D~~~---i--------~FLi~~e~  375 (641)
T KOG0352         309 IAATVSFGMGVDKPDVRFVIHWS-PSQNLAGYYQESGRAGRDGKRSYCRLYYSRQ-DKNA---L--------NFLVSGEL  375 (641)
T ss_pred             EEEEECCCCCCCCCCEEEEEECC-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCC-CHHH---H--------HHHHHHHH
T ss_conf             99960244466877615999517-0565789988615356677725201333214-0577---7--------79977678


Q ss_pred             HHHCCCCC
Q ss_conf             85206300
Q gi|254780945|r  625 LKQRKEGE  632 (700)
Q Consensus       625 l~lRG~G~  632 (700)
T Consensus       376 aklrek~~  383 (641)
T KOG0352         376 AKLREKAK  383 (641)
T ss_pred             HHHHHHCC
T ss_conf             99876313