HHsearch alignment for GI: 254780945 and conserved domain: KOG0352
>KOG0352 consensus.
Probab=99.19 E-value=1.8e-08 Score=85.99 Aligned_cols=313 Identities=21% Similarity=0.287 Sum_probs=197.8
Q ss_pred CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 98899999999984100134307886214422369999997334443054588612799999999862110145786589
Q gi|254780945|r 274 TKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVE 353 (700)
Q Consensus 274 T~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~ 353 (700)
T Consensus 22 s~LQE~A~~c~VK~k~DV-----yVsMPTGaGKSLCyQLPaL~---~~gITIV~SPLiALIkDQiDHL~~----LKVp~~ 89 (641)
T KOG0352 22 SRLQEQAINCIVKRKCDV-----YVSMPTGAGKSLCYQLPALV---HGGITIVISPLIALIKDQIDHLKR----LKVPCE 89 (641)
T ss_pred CHHHHHHHHHHHHCCCCE-----EEECCCCCCHHHHHHCHHHH---HCCEEEEECHHHHHHHHHHHHHHH----HCCCHH
T ss_conf 757899899988346737-----99646887601454265877---288189930789999999877874----056166
Q ss_pred EEECCCCHHHHHHHHHHHCCCCCE--EEEEC---------HHHCCCCCCCCCCCEEEECCCCCCCHHHH-----------
Q ss_conf 962464225667687762134754--86411---------12013345544441788521013356889-----------
Q gi|254780945|r 354 IITGNMPQAHRRKALERIAHGQAH--IIIGT---------HALFQDSIQYYKLILVIVDEQHRFGVQQR----------- 411 (700)
Q Consensus 354 lLtg~~~~~er~~i~~~i~~G~~~--iiIGT---------HAL~q~~v~F~~LgLvViDEQHRFGV~QR----------- 411 (700)
T Consensus 90 SLNSKlSt~ER~ri~~DL~~ekp~~K~LYITPE~AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHC--VSQWGHDFRPDYL~L 167 (641)
T KOG0352 90 SLNSKLSTVERSRIMGDLAKEKPTIKMLYITPEGAATDGFQKLLNGLANRDVLRYIVVDEAHC--VSQWGHDFRPDYLTL 167 (641)
T ss_pred HHHCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHH--HHHHCCCCCCCHHHH
T ss_conf 640121078899998888743775148997631555666899999887414022477334666--776266668204446
Q ss_pred HHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEE----------------CCCHHHHHHHH
Q ss_conf 98740256776101010132278999975201011110235576662079997----------------02002689999
Q gi|254780945|r 412 LKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIP----------------INRIDEVIERL 475 (700)
Q Consensus 412 ~~L~~Kg~~ph~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~----------------~~~~~~~~~~i 475 (700)
T Consensus 168 G~LRS~~~~vpwvALTATA~~~VqED-i~~qL~L---------~~PVAiFkTP~FR~NLFYD~~~K~~I~D~~~~LaDF~ 237 (641)
T KOG0352 168 GSLRSVCPGVPWVALTATANAKVQED-IAFQLKL---------RNPVAIFKTPTFRDNLFYDNHMKSFITDCLTVLADFS 237 (641)
T ss_pred HHHHHHCCCCCEEEEECCCCHHHHHH-HHHHHHC---------CCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 66774469996698543467767799-9999760---------5854440574145444578888876413777899999
Q ss_pred HHHHCC---------CC-EEEEE-ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf 763103---------87-38999-71201221112101466666668663710312014699899999999975598699
Q gi|254780945|r 476 KVVLSE---------GK-KAYWI-CPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKL 544 (700)
Q Consensus 476 ~~~l~~---------g~-q~y~V-cPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~i 544 (700)
T Consensus 238 ~~~LG~~~~~~~~~K~~~GCGIVYCRTR~~cE--------q~AI~l~-~~Gi~A~AYHAGLK~~ERTeVQe~WM~~~~Pv 308 (641)
T KOG0352 238 SSNLGKHEKASQNKKTFTGCGIVYCRTRNECE--------QVAIMLE-IAGIPAMAYHAGLKKKERTEVQEKWMNNEIPV 308 (641)
T ss_pred HHHCCCCHHHHCCCCCCCCCEEEEECCHHHHH--------HHHHHHH-HCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCE
T ss_conf 98628904441178777773279960288999--------8988753-24762677650014112688999986278877
Q ss_pred EEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf 99800341046888765899858525474688773011667898359999708889987999999998414258999999
Q gi|254780945|r 545 LIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEED 624 (700)
Q Consensus 545 LvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~dGf~iAe~D 624 (700)
T Consensus 309 I~AT~SFGMGVDKp~VRFViHW~-~~qn~AgYYQESGRAGRDGk~SyCRLYYsR~-D~~~---i--------~FLi~~e~ 375 (641)
T KOG0352 309 IAATVSFGMGVDKPDVRFVIHWS-PSQNLAGYYQESGRAGRDGKRSYCRLYYSRQ-DKNA---L--------NFLVSGEL 375 (641)
T ss_pred EEEEECCCCCCCCCCEEEEEECC-HHHHHHHHHHHCCCCCCCCCCCCEEEEECCC-CHHH---H--------HHHHHHHH
T ss_conf 99960244466877615999517-0565789988615356677725201333214-0577---7--------79977678
Q ss_pred HHHCCCCC
Q ss_conf 85206300
Q gi|254780945|r 625 LKQRKEGE 632 (700)
Q Consensus 625 l~lRG~G~ 632 (700)
T Consensus 376 aklrek~~ 383 (641)
T KOG0352 376 AKLREKAK 383 (641)
T ss_pred HHHHHHCC
T ss_conf 99876313