HHsearch alignment for GI: 254780945 and conserved domain: KOG0388

Probab=92.72  E-value=0.88  Score=25.71  Aligned_cols=155  Identities=20%  Similarity=0.285  Sum_probs=90.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH---CCEEEEEHHHHHHHHHHHHHHHHCCCC
Q ss_conf             67988999999999841001343078862144223699999973344430---545886127999999998621101457
Q gi|254780945|r  272 SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAG---GQAVIMAPIGILAQQHYEFIKKYTQNT  348 (700)
Q Consensus       272 ~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G---~Q~alMaPTEILA~QH~~~~~~~~~~~  348 (700)
T Consensus       567 tLKEYQlkGLnWLvnlY--dqGiNGILADeMGLGKTVQsisvlAhLaE~~nIwGPFLVVtpaStL~N-WaqEisrFlP~~  643 (1185)
T KOG0388         567 TLKEYQLKGLNWLVNLY--DQGINGILADEMGLGKTVQSISVLAHLAETHNIWGPFLVVTPASTLHN-WAQEISRFLPSF  643 (1185)
T ss_pred             HHHHHHHCCHHHHHHHH--HCCCCCEEHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHH-HHHHHHHHCCCC
T ss_conf             16887650078999998--703441213330453268899999999874458876389602787767-999999858654


Q ss_pred             CCEEEEEECCCCHHHHHHHHHHH-------CCCCCEEEEECHHH-CC-----CCCCCCCCCEEEECCCCCCCHHH--HHH
Q ss_conf             86589962464225667687762-------13475486411120-13-----34554444178852101335688--998
Q gi|254780945|r  349 QIIVEIITGNMPQAHRRKALERI-------AHGQAHIIIGTHAL-FQ-----DSIQYYKLILVIVDEQHRFGVQQ--RLK  413 (700)
Q Consensus       349 ~i~v~lLtg~~~~~er~~i~~~i-------~~G~~~iiIGTHAL-~q-----~~v~F~~LgLvViDEQHRFGV~Q--R~~  413 (700)
T Consensus       644 --k~lpywGs~--~eRkiLrKfw~rKnmY~rna~fhVviTSYQlvVtDeky~qkvKWQ---YMILDEAQAIKSSsS~RWK  716 (1185)
T KOG0388         644 --KVLPYWGSP--SERKILRKFWNRKNMYRRNAPFHVVITSYQLVVTDEKYLQKVKWQ---YMILDEAQAIKSSSSSRWK  716 (1185)
T ss_pred             --EEECCCCCH--HHHHHHHHHCCHHHHHCCCCCCEEEEEEEEEEECHHHHHHHHHHH---HEEHHHHHHHHHHHHHHHH
T ss_conf             --243476880--266899974044444304799528997531111159999863345---2005578776432256788


Q ss_pred             -HHHCCCCCCCEEECHHHHHHHHHH
Q ss_conf             -740256776101010132278999
Q gi|254780945|r  414 -LTQKATAPHVLLMTATPIPRTLVL  437 (700)
Q Consensus       414 -L~~Kg~~ph~L~MtATPIPRTLal  437 (700)
T Consensus       717 tLLs-F~cRNRLLLTGTPIQNsMqE  740 (1185)
T KOG0388         717 TLLS-FKCRNRLLLTGTPIQNSMQE  740 (1185)
T ss_pred             HHHH-HHCCCEEEECCCCCCHHHHH
T ss_conf             7740-21034045318853017999