HHsearch alignment for GI: 254780945 and conserved domain: KOG0924
>KOG0924 consensus.
Probab=97.94 E-value=0.0021 Score=46.25 Aligned_cols=271 Identities=19% Similarity=0.251 Sum_probs=162.7
Q ss_pred EEEEECCCCCHHHHHHH-HHHH-HHHHHCCEEEEEHHHHHHHHHHHHHHHHCC-CCC------CEEEEEECCCCHHHHHH
Q ss_conf 78862144223699999-9733-444305458861279999999986211014-578------65899624642256676
Q gi|254780945|r 296 RILQGDVGSGKTLVALI-AMAA-AVEAGGQAVIMAPIGILAQQHYEFIKKYTQ-NTQ------IIVEIITGNMPQAHRRK 366 (700)
Q Consensus 296 RLLQGDVGSGKTiVA~~-A~l~-~~~~G~Q~alMaPTEILA~QH~~~~~~~~~-~~~------i~v~lLtg~~~~~er~~ 366 (700)
T Consensus 374 vvivgETGSGKTTQl~QyL~edGY~~~G-mIGcTQPRRvAAiSVAkrVa~EM~~~lG~~VGYsIRFEdvT~~-------- 444 (1042)
T KOG0924 374 VVIVGETGSGKTTQLAQYLYEDGYADNG-MIGCTQPRRVAAISVAKRVAEEMGVTLGDTVGYSIRFEDVTSE-------- 444 (1042)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCC-EEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCC--------
T ss_conf 9999358898501667999862245587-1543572278999999999998587645311248885204787--------
Q ss_pred HHHHHCCCCCEEEEEC-HHHCCCCCCCC---CCCEEEECCCCCCCHHHH-------HHHHHCCCCCCCEEECHHHHHHHH
Q ss_conf 8776213475486411-12013345544---441788521013356889-------987402567761010101322789
Q gi|254780945|r 367 ALERIAHGQAHIIIGT-HALFQDSIQYY---KLILVIVDEQHRFGVQQR-------LKLTQKATAPHVLLMTATPIPRTL 435 (700)
Q Consensus 367 i~~~i~~G~~~iiIGT-HAL~q~~v~F~---~LgLvViDEQHRFGV~QR-------~~L~~Kg~~ph~L~MtATPIPRTL 435 (700)
T Consensus 445 --------~T~IkymTDGiLLrEsL~d~~L~kYSviImDEAHERslNtDilfGllk~~lar-RrdlKliVtSATm~a~kf 515 (1042)
T KOG0924 445 --------DTKIKYMTDGILLRESLKDRDLDKYSVIIMDEAHERSLNTDILFGLLKKVLAR-RRDLKLIVTSATMDAQKF 515 (1042)
T ss_pred --------CEEEEEECCCHHHHHHHHHHHHHHEEEEEECHHHHCCCCHHHHHHHHHHHHHH-HCCCEEEEEECCCCHHHH
T ss_conf --------60578742305779776330044401788511433030058999999999874-226359976220248999
Q ss_pred HHHHHHCCCHHHHCCCCCCCC-CCEEEEEECCCHHHHHHHHHHHHC----CCCEEEEEECCCCCCCCCCCCHHHHHHHHH
Q ss_conf 999752010111102355766-620799970200268999976310----387389997120122111210146666666
Q gi|254780945|r 436 VLTSLGDIDISKITEKPAGRK-PIKTVIIPINRIDEVIERLKVVLS----EGKKAYWICPQIEEKKESNFRSVVERFNSL 510 (700)
Q Consensus 436 al~~ygdldvS~i~e~P~gR~-~I~T~~~~~~~~~~~~~~i~~~l~----~g~q~y~VcPlIeese~~~~~~~~~~~~~l 510 (700)
T Consensus 516 ~n-fFgn~p~f~I----pGRTyPV~~~~~k~p~eDYVeaavkq~v~Ihl~~~~GdilIfmtG----q---ediE~t~~~i 583 (1042)
T KOG0924 516 SN-FFGNCPQFTI----PGRTYPVEIMYTKTPVEDYVEAAVKQAVQIHLSGPPGDILIFMTG----Q---EDIECTCDII 583 (1042)
T ss_pred HH-HHCCCCEEEE----CCCCCCEEEEECCCCHHHHHHHHHHHHEEEECCCCCCCEEEECCC----C---CCHHHHHHHH
T ss_conf 88-7278860101----587642377752685588999987654585446898877995278----7---6326789999
Q ss_pred HHHC------C--C-CEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEE--------EECHHHCCH
Q ss_conf 8663------7--1-031201469989999999997559869999800341046888765899--------858525474
Q gi|254780945|r 511 HEHF------T--S-SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIII--------IENAEHFGL 573 (700)
Q Consensus 511 ~~~~------~--~-~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mv--------I~~aerfGL 573 (700)
T Consensus 584 ~~~l~ql~~~~~~~L~vlpiYSQLp~dlQ~kiFq~a~~~vRK~IvATNIAETSLTi~gI~yVID~Gy~K~kvyn~-~~G~ 662 (1042)
T KOG0924 584 KEKLEQLDSAPTTDLAVLPIYSQLPADLQAKIFQKAEGGVRKCIVATNIAETSLTIPGIRYVIDTGYCKLKVYNP-RIGM 662 (1042)
T ss_pred HHHHHHHHCCCCCCEEEEEEHHHCCHHHHHHHCCCCCCCCEEEEEECCCHHHCEEECCEEEEEECCCEEEEECCC-CCCC
T ss_conf 999975523888862788405528666664330568888126998622112113326648997257245641056-6564
Q ss_pred ----------HHHHHHHHCCCCCCCCEEEEEEECC
Q ss_conf ----------6887730116678983599997088
Q gi|254780945|r 574 ----------AQLHQLRGRVGRGEEISSCILLYHP 598 (700)
Q Consensus 574 ----------sqLHQLRGRVGRg~~~s~c~l~~~~ 598 (700)
T Consensus 663 D~L~~~pIS~AnA~QRaGRAGR-t~pG~cYRlYTe 696 (1042)
T KOG0924 663 DALQIVPISQANADQRAGRAGR-TGPGTCYRLYTE 696 (1042)
T ss_pred CEEEEEECHHCCCHHHCCCCCC-CCCCCEEEEHHH
T ss_conf 2257875122131011244578-899626530236