HHsearch alignment for GI: 254780945 and conserved domain: KOG0947
>KOG0947 consensus.
Probab=99.14 E-value=4.7e-08 Score=82.75 Aligned_cols=357 Identities=22% Similarity=0.293 Sum_probs=222.4
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHH
Q ss_conf 78999986302467988999999999841001343078862144223699999973344430545886127999999998
Q gi|254780945|r 260 KIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYE 339 (700)
Q Consensus 260 ~~~~~f~~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~ 339 (700)
T Consensus 285 ~lVpe~a~~~pFelD~FQk~Ai~~lerg----~--SVFVAAHTSAGKTvVAEYAialaq~h~TR~iYTSPIKALSNQKfR 358 (1248)
T KOG0947 285 QLVPEMALIYPFELDTFQKEAIYHLERG----D--SVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFR 358 (1248)
T ss_pred HHCHHHHHHCCCCCCHHHHHHHHHHHCC----C--EEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHCCCHHH
T ss_conf 8440688618877667899999999727----8--179971377884369999999988635515752634654001578
Q ss_pred HHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHC-----CCCCCCCCCCEEEECCCCCCCHHHHHHH
Q ss_conf 62110145786589962464225667687762134754864111201-----3345544441788521013356889987
Q gi|254780945|r 340 FIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALF-----QDSIQYYKLILVIVDEQHRFGVQQRLKL 414 (700)
Q Consensus 340 ~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~-----q~~v~F~~LgLvViDEQHRFGV~QR~~L 414 (700)
T Consensus 359 DFk~tF~Dvg----LlTGDvqi-----------nPeAsCLIMTTEILRsMLYrgadliRDvE~VIFDEVHYiND~eRGvV 423 (1248)
T KOG0947 359 DFKETFGDVG----LLTGDVQI-----------NPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYINDVERGVV 423 (1248)
T ss_pred HHHHHCCCCC----EEECCEEE-----------CCCCCEEEEHHHHHHHHHHCCCCHHHCCCEEEEEEEEECCCCCCCCC
T ss_conf 8877426665----45144332-----------77754676569999998751554321133698740354144135622
Q ss_pred HHC-----CCCCCCEEECHHHHHHHHHHHHH-HCC---CHHHHCCCCCCCCCCEEEEEECC-------------------
Q ss_conf 402-----56776101010132278999975-201---01111023557666207999702-------------------
Q gi|254780945|r 415 TQK-----ATAPHVLLMTATPIPRTLVLTSL-GDI---DISKITEKPAGRKPIKTVIIPIN------------------- 466 (700)
Q Consensus 415 ~~K-----g~~ph~L~MtATPIPRTLal~~y-gdl---dvS~i~e~P~gR~~I~T~~~~~~------------------- 466 (700)
T Consensus 424 WEEViIMlP~HV~~IlLSAT-VPN~~EFA~WIGRtK~K~IyViST-~kRPVPLEh~l~t~~~l~kiidq~g~fl~~~~~~ 501 (1248)
T KOG0947 424 WEEVIIMLPRHVNFILLSAT-VPNTLEFADWIGRTKQKTIYVIST-SKRPVPLEHYLYTKKSLFKIIDQNGIFLLKGIKD 501 (1248)
T ss_pred CEEEEEECCCCCEEEEEECC-CCCHHHHHHHHHHCCCCEEEEEEC-CCCCCCEEEEEEECCCEEHHHCCCCHHHHHCCHH
T ss_conf 10122532554159998465-798188888750404853899714-7886430789986663100015441435530101
Q ss_pred -----------------------------------------------CHH-HHHHHHHHHHCCCCEE---EEEE------
Q ss_conf -----------------------------------------------002-6899997631038738---9997------
Q gi|254780945|r 467 -----------------------------------------------RID-EVIERLKVVLSEGKKA---YWIC------ 489 (700)
Q Consensus 467 -----------------------------------------------~~~-~~~~~i~~~l~~g~q~---y~Vc------ 489 (700)
T Consensus 502 a~~~~~~~ak~~~~~~~~~~~~rgs~~~ggk~~~~~g~~r~~~~~~nrr~~~~~l~lin~L~k~~lLP~VvFvFSkkrCd 581 (1248)
T KOG0947 502 AKDSLKKEAKFVDVEKSDARGGRGSQKRGGKTNYHNGGSRGSGIGKNRRKQPTWLDLINHLRKKNLLPVVVFVFSKKRCD 581 (1248)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHH
T ss_conf 11122244443313254454666554667767888887666665432344440999999985224676699997356578
Q ss_pred ---------CCCCCCCCCCCCHHHH-HHHHHH-------------HHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf ---------1201221112101466-666668-------------66371031201469989999999997559869999
Q gi|254780945|r 490 ---------PQIEEKKESNFRSVVE-RFNSLH-------------EHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLI 546 (700)
Q Consensus 490 ---------PlIeese~~~~~~~~~-~~~~l~-------------~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLv 546 (700)
T Consensus 582 e~a~~L~~~nL~~~~EKseV~lfl~k~~~rLk~~DR~LPQvl~m~~ll~RGiaVHH~GlLPivKE~VE~LFqrGlVKVLF 661 (1248)
T KOG0947 582 EYADYLTNLNLTDSKEKSEVHLFLSKAVARLKGEDRNLPQVLSMRSLLLRGIAVHHGGLLPIVKEVVELLFQRGLVKVLF 661 (1248)
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 99999755576652127899999999998668543143377889999861403303663078999999997558547886
Q ss_pred ECHHHHCCCCCCCCCEEEE-----ECHHH--CCHHHHHHHHHCCCCCC--CCEEEEEEECCC-CCHHH------------
Q ss_conf 8003410468887658998-----58525--47468877301166789--835999970888-99879------------
Q gi|254780945|r 547 ATTVIEVGIDVVDASIIII-----ENAEH--FGLAQLHQLRGRVGRGE--EISSCILLYHPP-LSKNS------------ 604 (700)
Q Consensus 547 aTtviEVGvdvpna~~mvI-----~~aer--fGLsqLHQLRGRVGRg~--~~s~c~l~~~~~-~~~~~------------ 604 (700)
T Consensus 662 ATETFAMGVNMPARtvVF~Sl~KhDG~efR~L~PGEytQMAGRAGRRGlD~tGTVii~~~~~vp~~a~l~~li~G~~~~L 741 (1248)
T KOG0947 662 ATETFAMGVNMPARTVVFSSLRKHDGNEFRELLPGEYTQMAGRAGRRGLDETGTVIIMCKDSVPSAATLKRLIMGGPTRL 741 (1248)
T ss_pred EHHHHHHHCCCCCEEEEEEEHHHCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCHH
T ss_conf 41056511688740677330001368642543870577641102445668676089996688999899865750787200
Q ss_pred --HHHHH--HHHHHCHHHHHHHHHHHHCCCCCCCCCHHC
Q ss_conf --99999--998414258999999852063000260006
Q gi|254780945|r 605 --YTRLS--VLKNTEDGFLIAEEDLKQRKEGEILGIKQS 639 (700)
Q Consensus 605 --~~Rl~--~l~~~~dGf~iAe~Dl~lRG~G~~~G~~Qs 639 (700)
T Consensus 742 ~SQFRlTY~MILnLLRve~lrvEdm~krSf~E~~s~~~~ 780 (1248)
T KOG0947 742 ESQFRLTYGMILNLLRVEALRVEDMMKRSFSEFVSQRLS 780 (1248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 445445799999998777889999999876310231017