HHsearch alignment for GI: 254780945 and conserved domain: KOG0953
>KOG0953 consensus.
Probab=98.42 E-value=5.4e-05 Score=58.76 Aligned_cols=276 Identities=21% Similarity=0.356 Sum_probs=174.0
Q ss_pred HHHCCCCCC--HHHHHHHHHHHHHHCCC-------CCCEE---EEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHH
Q ss_conf 863024679--88999999999841001-------34307---8862144223699999973344430545886127999
Q gi|254780945|r 266 LRNIPFSPT--KSQESAIKDILQDMSQK-------NRMLR---ILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGIL 333 (700)
Q Consensus 266 ~~~LPF~LT--~~Q~~ai~eI~~Dl~~~-------~pM~R---LLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEIL 333 (700)
T Consensus 158 k~~fp-~l~~~Ddl~-----~isDLt~P~~WyP~AR~~~RkIi~H~GPTNSGKTy~AL----qrl~~aksGvycGPLrLL 227 (700)
T KOG0953 158 KQEFP-ELTRMDDLK-----KISDLTNPANWYPEARKIRRKIIMHVGPTNSGKTYRAL----QRLKSAKSGVYCGPLRLL 227 (700)
T ss_pred HHHHC-CCCCCHHHH-----HHHCCCCCCCCCCHHHHHHHEEEEEECCCCCCHHHHHH----HHHHHHCCCEECCHHHHH
T ss_conf 77712-033602555-----54304798544825675431589875788884257999----987540266002608989
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEECCCCCCCHHHH--
Q ss_conf 999998621101457865899624642256676877621347548641112013345544441788521013356889--
Q gi|254780945|r 334 AQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQR-- 411 (700)
Q Consensus 334 A~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViDEQHRFGV~QR-- 411 (700)
T Consensus 228 A~EV~~r~na----~gipCdL~TGe----E~~~~~~~--~~~a~hvScTVEM~sv~~~ye---VAViDEIQmm~Dp~RGw 294 (700)
T KOG0953 228 AHEVYDRLNA----LGIPCDLLTGE----ERRFVLDN--GNPAQHVSCTVEMVSVNTPYE---VAVIDEIQMMRDPSRGW 294 (700)
T ss_pred HHHHHHHHHH----CCCCCCCCCCC----EEEECCCC--CCCCCCEEEEEEEEECCCCEE---EEEEHHHHHHCCCCCCH
T ss_conf 9999987643----28873344461----25405788--886651478999840687057---88766677622765235
Q ss_pred ----HHHHHCCCCCCCE-EECHHHHHHHHHHHHHHCCCHHHHCCCCCCCC-CCEEEEEECCCHHHHHHHHHHHHCCCCEE
Q ss_conf ----9874025677610-10101322789999752010111102355766-62079997020026899997631038738
Q gi|254780945|r 412 ----LKLTQKATAPHVL-LMTATPIPRTLVLTSLGDIDISKITEKPAGRK-PIKTVIIPINRIDEVIERLKVVLSEGKKA 485 (700)
Q Consensus 412 ----~~L~~Kg~~ph~L-~MtATPIPRTLal~~ygdldvS~i~e~P~gR~-~I~T~~~~~~~~~~~~~~i~~~l~~g~q~ 485 (700)
T Consensus 295 AWTrALLGl~AdEiHLCGepsvldlV~~i~k~TGd~vev~~Ye-----Rl~pL---~v~----~~~~~sl-~nlk~G-DC 360 (700)
T KOG0953 295 AWTRALLGLAADEIHLCGEPSVLDLVRKILKMTGDDVEVREYE-----RLSPL---VVE----ETALGSL-SNLKPG-DC 360 (700)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEC-----CCCCC---EEH----HHHHHHH-CCCCCC-CE
T ss_conf 9999987440556100588048999999986317814897600-----05765---000----4232023-068888-76
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHC--CCEEEEEECHHHHCCCCCCCCCEE
Q ss_conf 999712012211121014666666686637103120146998999999999755--986999980034104688876589
Q gi|254780945|r 486 YWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKN--GTCKLLIATTVIEVGIDVVDASII 563 (700)
Q Consensus 486 y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~--g~~~iLvaTtviEVGvdvpna~~m 563 (700)
T Consensus 361 -vV~F----Sk----k~I~~~k~kIE~~g~~k~aVIYGsLPPeTr~aQA~~FNd~~~e~dvlVAsDAIGMGLNL~IrRii 431 (700)
T KOG0953 361 -VVAF----SK----KDIFTVKKKIEKAGNHKCAVIYGSLPPETRLAQAALFNDPSNECDVLVASDAIGMGLNLNIRRII 431 (700)
T ss_pred -EEEE----EH----HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEE
T ss_conf -9994----11----14888899999855855489955899730688898737988762568862321455444311798
Q ss_pred EE-------ECHHHCCHHHHHHHHHCCCCCC
Q ss_conf 98-------5852547468877301166789
Q gi|254780945|r 564 II-------ENAEHFGLAQLHQLRGRVGRGE 587 (700)
Q Consensus 564 vI-------~~aerfGLsqLHQLRGRVGRg~ 587 (700)
T Consensus 432 F~sl~Kysg~e~~~it~sqikQIAGRAGRf~ 462 (700)
T KOG0953 432 FYSLIKYSGRETEDITVSQIKQIAGRAGRFG 462 (700)
T ss_pred EEECCCCCCCCCEECCHHHHHHHHHCCCCCC
T ss_conf 7503567766210256899998851015445