HHsearch alignment for GI: 254780945 and conserved domain: KOG1000
>KOG1000 consensus.
Probab=95.86 E-value=0.054 Score=35.22 Aligned_cols=326 Identities=20% Similarity=0.295 Sum_probs=174.1
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCC
Q ss_conf 63024679889999999998410013430788621442236999999733444305458861279999999986211014
Q gi|254780945|r 267 RNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQ 346 (700)
Q Consensus 267 ~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~ 346 (700)
T Consensus 198 ~LlPFQre--------Gv~faL~RgGR~--llADeMGLGKTiQAl-aIA~yyraEwplliVcPAsv-rftWa~al~r~lp 265 (689)
T KOG1000 198 RLLPFQRE--------GVIFALERGGRI--LLADEMGLGKTIQAL-AIARYYRAEWPLLIVCPASV-RFTWAKALNRFLP 265 (689)
T ss_pred HHCCHHHH--------HHHHHHHCCCEE--EEECCCCCCHHHHHH-HHHHHHHHCCCEEEEECHHH-HHHHHHHHHHHCC
T ss_conf 61703565--------478898538739--984124541688999-99999860486799922788-6899999998531
Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHH-CCCCCEEEEECH-HHCCCCCCCCCCCEEEECCCCCCCHHHHHH------HHHCC
Q ss_conf 5786589962464225667687762-134754864111-201334554444178852101335688998------74025
Q gi|254780945|r 347 NTQIIVEIITGNMPQAHRRKALERI-AHGQAHIIIGTH-ALFQDSIQYYKLILVIVDEQHRFGVQQRLK------LTQKA 418 (700)
Q Consensus 347 ~~~i~v~lLtg~~~~~er~~i~~~i-~~G~~~iiIGTH-AL~q~~v~F~~LgLvViDEQHRFGV~QR~~------L~~Kg 418 (700)
T Consensus 266 s~~-pi~vv~~~~D------~~~~~~t~~~v~ivSye~ls~l~~~l~~~~~~vvI~DEsH~Lk~sktkr~Ka~~dllk-- 336 (689)
T KOG1000 266 SIH-PIFVVDKSSD------PLPDVCTSNTVAIVSYEQLSLLHDILKKEKYRVVIFDESHMLKDSKTKRTKAATDLLK-- 336 (689)
T ss_pred CCC-CEEEEECCCC------CCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHHH--
T ss_conf 026-0478852667------7654566772789878999999998736541189971256541011223666656998--
Q ss_pred CCCCCEEECHHHH-HHHHHH---------HHHHC-----------------------------------------CCHHH
Q ss_conf 6776101010132-278999---------97520-----------------------------------------10111
Q gi|254780945|r 419 TAPHVLLMTATPI-PRTLVL---------TSLGD-----------------------------------------IDISK 447 (700)
Q Consensus 419 ~~ph~L~MtATPI-PRTLal---------~~ygd-----------------------------------------ldvS~ 447 (700)
T Consensus 337 ~akhvILLSGTPavSRP~elytqi~avd~tlfp~f~efa~rYCd~k~vr~~~Dykg~tnl~EL~~lL~k~lMIRRlK~dv 416 (689)
T KOG1000 337 VAKHVILLSGTPAVSRPSELYTQIRAVDHTLFPNFHEFAIRYCDGKQVRFCFDYKGCTNLEELAALLFKRLMIRRLKADV 416 (689)
T ss_pred HHHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76444772388556781442135554121004228998777537641102450377877899999999999999999988
Q ss_pred HCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEE----------------------EEEECCCCC--------CCC
Q ss_conf 10235576662079997020026899997631038738----------------------999712012--------211
Q gi|254780945|r 448 ITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKA----------------------YWICPQIEE--------KKE 497 (700)
Q Consensus 448 i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l~~g~q~----------------------y~VcPlIee--------se~ 497 (700)
T Consensus 417 L~qLPpKrr~V-v~~~~gr~da~~~~lv~~a~-~~t~~~~~e~~~~~l~l~y~~tgiaK~~av~eyi~~~~~l~d~~~~K 494 (689)
T KOG1000 417 LKQLPPKRREV-VYVSGGRIDARMDDLVKAAA-DYTKVNSMERKHESLLLFYSLTGIAKAAAVCEYILENYFLPDAPPRK 494 (689)
T ss_pred HHHCCCCCEEE-EEECCCCCCHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCE
T ss_conf 75388010489-99747862267899998753-20012366665677887898751102088999997474445688735
Q ss_pred CC-CCHHHHHHHHHHHHCCC-CEEC--CCCCCCHHHHHHHHHHHHCCC-EE-EEEECHHHHCCCCCCCCCEEEEECHHH-
Q ss_conf 12-10146666666866371-0312--014699899999999975598-69-999800341046888765899858525-
Q gi|254780945|r 498 SN-FRSVVERFNSLHEHFTS-SIAI--IHGRMSDIDKESVMDSFKNGT-CK-LLIATTVIEVGIDVVDASIIIIENAEH- 570 (700)
Q Consensus 498 ~~-~~~~~~~~~~l~~~~~~-~v~~--lHGkm~~~ek~~~m~~F~~g~-~~-iLvaTtviEVGvdvpna~~mvI~~aer- 570 (700)
T Consensus 495 flVFaHH~~vLd~Iq~~~~~r~vg~IRIDGst~s~~R~ll~qsFQ~seev~VAvlsItA~gvGLt~tAa~~VVF--aEL~ 572 (689)
T KOG1000 495 FLVFAHHQIVLDTIQVEVNKRKVGSIRIDGSTPSHRRTLLCQSFQTSEEVRVAVLSITAAGVGLTLTAASVVVF--AELH 572 (689)
T ss_pred EEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEEE--EEEC
T ss_conf 99994148799999999987479758856989843478999873146314799999863144414651325899--9823
Q ss_pred CCHHHHHHHHHCCCCCCCCEE---EEEEECCCCCH----HHHHHHHHHHHHCHH
Q ss_conf 474688773011667898359---99970888998----799999999841425
Q gi|254780945|r 571 FGLAQLHQLRGRVGRGEEISS---CILLYHPPLSK----NSYTRLSVLKNTEDG 617 (700)
Q Consensus 571 fGLsqLHQLRGRVGRg~~~s~---c~l~~~~~~~~----~~~~Rl~~l~~~~dG 617 (700)
T Consensus 573 wnPgvLlQAEDRaHRiGQkssV~v~ylvAKgT~Ddy~Wp~l~~KL~vl~s~gl~ 626 (689)
T KOG1000 573 WNPGVLLQAEDRAHRIGQKSSVFVQYLVAKGTADDYMWPMLQQKLDVLGSVGLS 626 (689)
T ss_pred CCCCEEEECHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 787547751465664056651138999954845777789999998788662567