HHsearch alignment for GI: 254780945 and conserved domain: KOG1802

Probab=95.83  E-value=0.036  Score=36.64  Aligned_cols=80  Identities=29%  Similarity=0.417  Sum_probs=62.2

Q ss_pred             HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH-HHCCEEEEEHHHHHHHHHHHHHHHHCC
Q ss_conf             3024679889999999998410013430788621442236999999733444-305458861279999999986211014
Q gi|254780945|r  268 NIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE-AGGQAVIMAPIGILAQQHYEFIKKYTQ  346 (700)
Q Consensus       268 ~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~-~G~Q~alMaPTEILA~QH~~~~~~~~~  346 (700)
T Consensus       407 ~lp-kLN~SQ~~AV~~VL~-----rpl-sLIQGPPGTGKTvtsa~IVyhl~~~~~~~VLvcApSNiAVDqLaeKIh~t--  477 (935)
T KOG1802         407 NLP-KLNASQSNAVKHVLQ-----RPL-SLIQGPPGTGKTVTSATIVYHLARQHAGPVLVCAPSNIAVDQLAEKIHKT--  477 (935)
T ss_pred             CCH-HHCHHHHHHHHHHHC-----CCC-EEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC--
T ss_conf             961-224678999999975-----985-15546999883311689999999852895699816500289999999861--


Q ss_pred             CCCCEEEEEECC
Q ss_conf             578658996246
Q gi|254780945|r  347 NTQIIVEIITGN  358 (700)
Q Consensus       347 ~~~i~v~lLtg~  358 (700)
T Consensus       478 --gLKVvRl~ak  487 (935)
T KOG1802         478 --GLKVVRLCAK  487 (935)
T ss_pred             --CCEEEEEEHH
T ss_conf             --8547640021