HHsearch alignment for GI: 254780945 and conserved domain: PRK04036

Probab=95.61  E-value=0.18  Score=31.18  Aligned_cols=103  Identities=20%  Similarity=0.286  Sum_probs=70.9

Q ss_pred             CCCHHHHHHHCCCCCCC-------CCCCCCHHHC----CCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEE
Q ss_conf             55489878708974013-------4444647888----998789999999897542158983389999818936999995
Q gi|254780945|r   38 ETRFIDLLFYHPSSFID-------RHYRPKISEI----SEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFF  106 (700)
Q Consensus        38 I~ti~DLL~~~PrrYeD-------r~~~~~I~~l----~~g~~vti~g~V~~~~~~~~~~r~~~~v~v~D~tg~i~lvfF  106 (700)
T Consensus       106 ~G~v~Dfv~~F~dRy~kL~~ii~~r~~~rpi~~i~~~~~~~~ev~IIGmV~d~r~---tknG~~~~~lED~tG~i~vli~  182 (497)
T PRK04036        106 EGEVEDFVKYFRDRYEKLRRIIRGRVNLRPIESLKKARKGEEEVSIIGMVSDIRS---TKNGHKIVELEDPTGTFSVLIM  182 (497)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEECCCEE---CCCCCEEEEEECCCCEEEEEEE
T ss_conf             5768999999999999999999727787875888863168960899999754131---3677479999878983999994


Q ss_pred             CCCHHHH--HHHCCCCCEEEEEEEEEECCCEE---EEECCEE
Q ss_conf             1887899--87328988899998997318779---9977868
Q gi|254780945|r  107 YRKTEML--KNVFFEGRKITVTGKIKKLKNRI---IMVHPHY  143 (700)
Q Consensus       107 n~~~~yl--~k~lk~G~~v~vsGKv~~~~~~~---qi~hPe~  143 (700)
T Consensus       183 k~~~~~~~~a~~ll~DeVIgv~G~~s~~g~~~f~~~i~~Pdi  224 (497)
T PRK04036        183 KDREDLGELAEDLLPDEVIGVKGTLSGDGPLMFADEIIRPDV  224 (497)
T ss_pred             CCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCC
T ss_conf             783787777762457757899999869987799840477999