HHsearch alignment for GI: 254780945 and conserved domain: PRK05298

Probab=96.49  E-value=0.016  Score=39.39  Aligned_cols=89  Identities=16%  Similarity=0.338  Sum_probs=73.8

Q ss_pred             HHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCC
Q ss_conf             73344430545886127999999998621101457865899624642256676877621347548641112013345544
Q gi|254780945|r  314 MAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYY  393 (700)
Q Consensus       314 ~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~  393 (700)
T Consensus       439 i~~~~~~~er~LvttlTkkma----EdLt~yl~~~~ik~~YlHs~i~t~eR~eIl~~LR~G~~DVlVGIN-LLREGLDlP  513 (657)
T PRK05298        439 IRKRVAKGERVLVTTLTKRMA----EDLTDYLKELGIKVRYLHSDIDTLERVEIIRDLRLGEFDVLVGIN-LLREGLDIP  513 (657)
T ss_pred             HHHHHHCCCEEEEEECHHHHH----HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEC-HHHCCCCCC
T ss_conf             999963697699995459899----999999996798079962666188999999998588875897500-220457876


Q ss_pred             CCCEEEECCCCCCC
Q ss_conf             44178852101335
Q gi|254780945|r  394 KLILVIVDEQHRFG  407 (700)
Q Consensus       394 ~LgLvViDEQHRFG  407 (700)
T Consensus       514 EVSLVaILDADKeG  527 (657)
T PRK05298        514 EVSLVAILDADKEG  527 (657)
T ss_pred             CEEEEEEEECCCCC
T ss_conf             13579887068522