HHsearch alignment for GI: 254780945 and conserved domain: PRK05580
>PRK05580 primosome assembly protein PriA; Validated.
Probab=97.58 E-value=0.0004 Score=51.92 Aligned_cols=72 Identities=21% Similarity=0.318 Sum_probs=54.4
Q ss_pred EEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC--HHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEEC
Q ss_conf 6127999999998621101457865899624642--25667687762134754864111201334554444178852
Q gi|254780945|r 327 MAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMP--QAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVD 401 (700)
Q Consensus 327 MaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~--~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViD 401 (700)
T Consensus 455 l~~~g~Gteri~eel~~~FP~~--~i~r~d~d~~~~~~~~~~~~~~~~~~~~dIlvGTq-miakG~df~~v~lv~vl 528 (699)
T PRK05580 455 LRAVGVGTERTEEELARLFPGA--RVLRIDRDTTRRKGALEQLLEDFARGEADILVGTQ-MLAKGHDFPNVTLVGVL 528 (699)
T ss_pred CCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCC-CCCCCCCCCCEEEEEEE
T ss_conf 2411168599999999778999--88998475567863168899997468987897773-34556777762699873