HHsearch alignment for GI: 254780945 and conserved domain: PRK07211
>PRK07211 replication factor A; Reviewed.
Probab=97.15 E-value=0.0042 Score=43.95 Aligned_cols=91 Identities=11% Similarity=0.190 Sum_probs=70.2
Q ss_pred CCCCCCCHHHCCCCC-EEEEEEEEEEEEEEC-CCC-------CCEEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEE
Q ss_conf 344446478889987-899999998975421-589-------83389999818936999995188789987328988899
Q gi|254780945|r 54 DRHYRPKISEISEER-IVTITGYISQHSSFQ-LQK-------RRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKIT 124 (700)
Q Consensus 54 Dr~~~~~I~~l~~g~-~vti~g~V~~~~~~~-~~~-------r~~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~ 124 (700)
T Consensus 49 ~~~ev~~I~dI~~~~~~V~F~akV~~v~d~RtF~R~~~dg~~GrV~ni~VaDeTG~IRvtLWDe~A~a~~~~ievGdVLk 128 (473)
T PRK07211 49 DDGEVNGVADIEPGMDEVKFLAKVTRVGDLRTFERDDEDDDDGRVINVEVADESGDVRVALWDDQAVAADDDLEPGDVLR 128 (473)
T ss_pred CHHHHCHHHCCCCCCCEEEEEEEEEEECCCEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECCHHHHHHHCCCCCCEEE
T ss_conf 61020202105777634799999815148644441688877633899998647895899985334677762445674899
Q ss_pred EEEEEEECCCEEEEECCEEE
Q ss_conf 99899731877999778689
Q gi|254780945|r 125 VTGKIKKLKNRIIMVHPHYI 144 (700)
Q Consensus 125 vsGKv~~~~~~~qi~hPe~~ 144 (700)
T Consensus 129 I~Gr~k~G~~G~Evs~~kie 148 (473)
T PRK07211 129 IKGRPKDGYNGLEVSADEVE 148 (473)
T ss_pred EEECCCCCCCCCEECHHHCC
T ss_conf 94034678666353021133