HHsearch alignment for GI: 254780945 and conserved domain: PRK07373

>PRK07373 DNA polymerase III subunit alpha; Reviewed.
Probab=97.65  E-value=0.001  Score=48.78  Aligned_cols=93  Identities=15%  Similarity=0.266  Sum_probs=44.4

Q ss_pred             EEECHHHHHHHH-HHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCC
Q ss_conf             010101322789-99975201011110235576662079997020026899997631-0387389997120122111210
Q gi|254780945|r  424 LLMTATPIPRTL-VLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVL-SEGKKAYWICPQIEEKKESNFR  501 (700)
Q Consensus       424 L~MtATPIPRTL-al~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l-~~g~q~y~VcPlIeese~~~~~  501 (700)
T Consensus       247 fYlSgHPL~~y~~~~~~~~~~~~~~l~~~~~~-~~V~~~g~I~~--------vr~~~TKkG-~~MAfvtLeD~tG~iEvv  316 (447)
T PRK07373        247 FYVSEHPLKSLQRPAPLLSPINLSQLEEQKER-TKVSAVVMLNG--------VKKIVTKKG-DPMAFLQLEDLSGQSEAV  316 (447)
T ss_pred             EEECCCHHHHHHHHHHHHCCCCHHHHHHCCCC-CEEEEEEEEEE--------EEEEECCCC-CEEEEEEEEECCCCEEEE
T ss_conf             68620737899999888387138996402489-78999999999--------999870489-659999999789748999


Q ss_pred             HHHHHHHHHHHHCC-CCEECCCCCCC
Q ss_conf             14666666686637-10312014699
Q gi|254780945|r  502 SVVERFNSLHEHFT-SSIAIIHGRMS  526 (700)
Q Consensus       502 ~~~~~~~~l~~~~~-~~v~~lHGkm~  526 (700)
T Consensus       317 vFpe~ye~~~~~L~~d~ivlv~Gkv~  342 (447)
T PRK07373        317 VFPKSYERIQELLQEDSRLIIWGKVD  342 (447)
T ss_pred             EEHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf             80899999988733799899999999