HHsearch alignment for GI: 254780945 and conserved domain: PRK08744
>PRK08744 consensus.
Probab=96.17 E-value=0.09 Score=33.47 Aligned_cols=127 Identities=14% Similarity=0.239 Sum_probs=72.1
Q ss_pred HHHHHHCCCC--EECCCCCCCHHHH-HHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEE-CHHHCCHHHHHHH----
Q ss_conf 6668663710--3120146998999-999999755986999980034104688876589985-8525474688773----
Q gi|254780945|r 508 NSLHEHFTSS--IAIIHGRMSDIDK-ESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIE-NAEHFGLAQLHQL---- 579 (700)
Q Consensus 508 ~~l~~~~~~~--v~~lHGkm~~~ek-~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~-~aerfGLsqLHQL---- 579 (700)
T Consensus 787 AyLKahyP~eFmaA~L~~~~~~~~k~~~~i~ear~~gi~vl------pPdIN~S~~~f~~~~~~~Ir~GL~aIkgvg~~~ 860 (1195)
T PRK08744 787 AWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVL------PPRVNESAYMFEAASPDTIQYGLGAIKGVGQGA 860 (1195)
T ss_pred HHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEE------CCCCCCCCCCEEEECCCCEEECCCCCCCCCHHH
T ss_conf 99986589999999844688997589999999998799695------884146788217607995564322113775999
Q ss_pred -----HHCCCCCCCCEEEEEEEC---CCCCHHHHHHH--------------HHHHHHCHHHHHHHHHHHHC--CCCCCCC
Q ss_conf -----011667898359999708---88998799999--------------99984142589999998520--6300026
Q gi|254780945|r 580 -----RGRVGRGEEISSCILLYH---PPLSKNSYTRL--------------SVLKNTEDGFLIAEEDLKQR--KEGEILG 635 (700)
Q Consensus 580 -----RGRVGRg~~~s~c~l~~~---~~~~~~~~~Rl--------------~~l~~~~dGf~iAe~Dl~lR--G~G~~~G 635 (700)
T Consensus 861 v~~Iv~~R~~~Gpf~sl~Df~~Rv~~~~~nkr~lE~LI~aGAfD~~g~~R~~ll~~~~~~~~~~~~~~~~~~~gq~~LF~ 940 (1195)
T PRK08744 861 CEAIVEERLRGGPYTTLLDFCTRVGTAKLNRRTLEAMINAGAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFG 940 (1195)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999848999999999974354569999999998678875768579999998999999999977877558867668
Q ss_pred CHHCC
Q ss_conf 00069
Q gi|254780945|r 636 IKQSG 640 (700)
Q Consensus 636 ~~QsG 640 (700)
T Consensus 941 ~~~~~ 945 (1195)
T PRK08744 941 GPDPS 945 (1195)
T ss_pred CCCCC
T ss_conf 88766