HHsearch alignment for GI: 254780945 and conserved domain: PRK08939

>PRK08939 primosomal protein DnaI; Reviewed.
Probab=95.33  E-value=0.17  Score=31.24  Aligned_cols=71  Identities=15%  Similarity=0.186  Sum_probs=47.7

Q ss_pred             CCCCH-HHHHHHHHHHH---HHCCCCCCEE-EEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHC
Q ss_conf             46798-89999999998---4100134307-8862144223699999973344430545886127999999998621101
Q gi|254780945|r  271 FSPTK-SQESAIKDILQ---DMSQKNRMLR-ILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYT  345 (700)
Q Consensus       271 F~LT~-~Q~~ai~eI~~---Dl~~~~pM~R-LLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~  345 (700)
T Consensus       130 ~~~~d~~R~~a~~~a~~F~~~y~~~~~~kGlyl~G~~G~GKTyL~~aian~La~~g~~v~~v~~p~~~~-----~lK~s~  204 (306)
T PRK08939        130 IDLDDLDRLDALMAALDFLEAYKPGEKVKGLYLYGDFGVGKTYLLAAIANELAKKGVSSTLVHFPEFIR-----ELKNAI  204 (306)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHH-----HHHHHH
T ss_conf             488977899999999999997376988877889899999899999999999998699299987599999-----999986


Q ss_pred             C
Q ss_conf             4
Q gi|254780945|r  346 Q  346 (700)
Q Consensus       346 ~  346 (700)
T Consensus       205 ~  205 (306)
T PRK08939        205 S  205 (306)
T ss_pred             C
T ss_conf             4