HHsearch alignment for GI: 254780945 and conserved domain: PRK08939
>PRK08939 primosomal protein DnaI; Reviewed.
Probab=95.33 E-value=0.17 Score=31.24 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=47.7
Q ss_pred CCCCH-HHHHHHHHHHH---HHCCCCCCEE-EEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHC
Q ss_conf 46798-89999999998---4100134307-8862144223699999973344430545886127999999998621101
Q gi|254780945|r 271 FSPTK-SQESAIKDILQ---DMSQKNRMLR-ILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYT 345 (700)
Q Consensus 271 F~LT~-~Q~~ai~eI~~---Dl~~~~pM~R-LLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~ 345 (700)
T Consensus 130 ~~~~d~~R~~a~~~a~~F~~~y~~~~~~kGlyl~G~~G~GKTyL~~aian~La~~g~~v~~v~~p~~~~-----~lK~s~ 204 (306)
T PRK08939 130 IDLDDLDRLDALMAALDFLEAYKPGEKVKGLYLYGDFGVGKTYLLAAIANELAKKGVSSTLVHFPEFIR-----ELKNAI 204 (306)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHH-----HHHHHH
T ss_conf 488977899999999999997376988877889899999899999999999998699299987599999-----999986
Q ss_pred C
Q ss_conf 4
Q gi|254780945|r 346 Q 346 (700)
Q Consensus 346 ~ 346 (700)
T Consensus 205 ~ 205 (306)
T PRK08939 205 S 205 (306)
T ss_pred C
T ss_conf 4