HHsearch alignment for GI: 254780945 and conserved domain: PRK09200
>PRK09200 preprotein translocase subunit SecA; Reviewed.
Probab=99.06 E-value=5e-08 Score=82.52 Aligned_cols=278 Identities=20% Similarity=0.247 Sum_probs=181.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-----CHHHHHHHHHHHCCCC
Q ss_conf 14422369999997334443054588612799999999862110145786589962464-----2256676877621347
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNM-----PQAHRRKALERIAHGQ 375 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~-----~~~er~~i~~~i~~G~ 375 (700)
T Consensus 99 ~TGEGKTL~a~l~~~l~al~g~~vhvvTvNdYLA~RDa~~m~~iy~~lGl~vg~~~~~~~~~~~~~~~r~~~Y~------ 172 (799)
T PRK09200 99 QTGEGKTLTATMPLYLNALEGKGVHLITTNDYLAKRDFEEMGQVYEFLGLTVGLNFSDIDDYEYQAGEKKAIYE------ 172 (799)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHH------
T ss_conf 17885899999999999746998189800557778879999999998296583336888644379799998874------
Q ss_pred CEEEEECHHHCC------------CCCCCCCCCEEEECCCC----------------------CCCHHHHH---------
Q ss_conf 548641112013------------34554444178852101----------------------33568899---------
Q gi|254780945|r 376 AHIIIGTHALFQ------------DSIQYYKLILVIVDEQH----------------------RFGVQQRL--------- 412 (700)
Q Consensus 376 ~~iiIGTHAL~q------------~~v~F~~LgLvViDEQH----------------------RFGV~QR~--------- 412 (700)
T Consensus 173 ~di~Y~tn~e~gfDyLrDn~~~~~~~~v~r~~~~aivDEvDsiLiDeArtPliisg~~~~~~~~~~~~~~~~~~l~~~~d 252 (799)
T PRK09200 173 ADIIYTTNSELGFDYLRDNLADSKEDKVLRPLNYAIIDEVDSILLDEAQTPLVISGAPRVQSNLYHIAAEFVKTLEEDVD 252 (799)
T ss_pred CCCEECCCCCCHHHHHCCCCCCCHHHCCCCCCCEEEEECHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 77222356540034530120156765257789668985326677741356412148987652799999999852677443
Q ss_pred ----------HHHHCC----------------------------------------------------------------
Q ss_conf ----------874025----------------------------------------------------------------
Q gi|254780945|r 413 ----------KLTQKA---------------------------------------------------------------- 418 (700)
Q Consensus 413 ----------~L~~Kg---------------------------------------------------------------- 418 (700)
T Consensus 253 y~~d~~~~~v~lt~~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~~~~~d~~YiV~~~~v~ivDe~TGR~~~gr~~ 332 (799)
T PRK09200 253 YEFDKEKKEVWLTDQGIEKAESYFGIDNLYSEEHQVLVRHIILALRAHYLFERDVDYIVYDGEIVLIDRFTGRVLPGRKL 332 (799)
T ss_pred EEEEHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCC
T ss_conf 78511006776244579999997099754765577899999999999999845862798668189987898874899826
Q ss_pred ---------------------------------CCCCCEEECHHHHHHHHHH---HHHHCCCHHHH-CCCCCCCCCCEEE
Q ss_conf ---------------------------------6776101010132278999---97520101111-0235576662079
Q gi|254780945|r 419 ---------------------------------TAPHVLLMTATPIPRTLVL---TSLGDIDISKI-TEKPAGRKPIKTV 461 (700)
Q Consensus 419 ---------------------------------~~ph~L~MtATPIPRTLal---~~ygdldvS~i-~e~P~gR~~I~T~ 461 (700)
T Consensus 333 s~GlhQaiEaKE~v~i~~e~~t~a~it~Qn~Fr~y~kl~GmTGTa--~~~~~Ef~~iY-~l~v~~iPtn~p~~r~d~~d~ 409 (799)
T PRK09200 333 QDGLHQAIEAKEGVEVTEENRTMASITIQNLFRMFPKLSGMTGTA--KTEEKEFFEVY-NMEVVQIPTNRPIIRIDYPDK 409 (799)
T ss_pred CHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCHHCCCCCCC--HHHHHHHHHHH-CCCEEECCCCCCCEEEECCCC
T ss_conf 657799999870898788873126644898986472312576760--98999999986-877698899998544547430
Q ss_pred EEEC--CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHC
Q ss_conf 9970--20026899997631038738999712012211121014666666686637103120146998999999999755
Q gi|254780945|r 462 IIPI--NRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKN 539 (700)
Q Consensus 462 ~~~~--~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~ 539 (700)
T Consensus 410 v~~t~~~k~~av~~~v~~~~~~g~pvLvgt~sv~~Se~~---s-----~~L~~~-~i~h~vLnAk~--~~~Ea~Iia~AG 478 (799)
T PRK09200 410 VFATVDEKYKAVIEEVKERHETGRPVLIGTGSIEQSEYF---S-----KLLFEA-GIPHNLLNAKN--AAQEAQIIAEAG 478 (799)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---H-----HHHHHC-CCCHHHCCCCC--HHHHHHHHHHCC
T ss_conf 108999999999999999985799889983857999999---9-----999865-76433205321--778999998278
Q ss_pred CCEEEEEECHHHHCCCCCC------CCCEEEEECHHHCCHHH-HHHHHHCCCCCCCCEEEEEEECC
Q ss_conf 9869999800341046888------76589985852547468-87730116678983599997088
Q gi|254780945|r 540 GTCKLLIATTVIEVGIDVV------DASIIIIENAEHFGLAQ-LHQLRGRVGRGEEISSCILLYHP 598 (700)
Q Consensus 540 g~~~iLvaTtviEVGvdvp------na~~mvI~~aerfGLsq-LHQLRGRVGRg~~~s~c~l~~~~ 598 (700)
T Consensus 479 ~~g~vTiaTnMAGRGtDI~l~~~v~~~GGL~Vigterhes~Rid~QlrGR~gRQGdpG~s~f~~sl 544 (799)
T PRK09200 479 QKGAVTVATNMAGRGTDIKLGEGVHELGGLAVIGTERMESRRVDLQLRGRSGRQGDPGSSQFFISL 544 (799)
T ss_pred CCCEEEEECCCCCCCCCCCCCCCHHHCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEC
T ss_conf 999489845455898695338453543881774034451466776751653457999854899851