HHsearch alignment for GI: 254780945 and conserved domain: PRK11057
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=92.88 E-value=0.87 Score=25.74 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=63.3
Q ss_pred HHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEE
Q ss_conf 43054588612799999999862110145786589962464225667687762134754864111201334554444178
Q gi|254780945|r 319 EAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILV 398 (700)
Q Consensus 319 ~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLv 398 (700)
T Consensus 234 ~~~~sgIIYc~trk~~e~la~~L~----~~G~~~~~YHagl~~~~R~~~q~~f~~~~~~vivAT~A-FGMGIdk~dVR~V 308 (607)
T PRK11057 234 QRGKSGIIYCNSRAKVEDTAARLQ----SRGISAAAYHAGLDNDVRADVQEAFQRDDLQIVVATVA-FGMGINKPNVRFV 308 (607)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHH----HCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEHH-HHCCCCCCCCCEE
T ss_conf 689977999692899999999998----57975453058999789999999875688758997501-1057677776679
Q ss_pred E
Q ss_conf 8
Q gi|254780945|r 399 I 399 (700)
Q Consensus 399 V 399 (700)
T Consensus 309 i 309 (607)
T PRK11057 309 V 309 (607)
T ss_pred E
T ss_conf 9