HHsearch alignment for GI: 254780945 and conserved domain: PRK12366

>PRK12366 replication factor A; Reviewed.
Probab=95.97  E-value=0.097  Score=33.24  Aligned_cols=87  Identities=20%  Similarity=0.261  Sum_probs=63.9

Q ss_pred             CCCCHHHCCCCCEEEEEEEEEEEEEEC-CCC-----CCEEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEEE
Q ss_conf             446478889987899999998975421-589-----83389999818936999995188789987328988899998997
Q gi|254780945|r   57 YRPKISEISEERIVTITGYISQHSSFQ-LQK-----RRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITVTGKIK  130 (700)
Q Consensus        57 ~~~~I~~l~~g~~vti~g~V~~~~~~~-~~~-----r~~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~vsGKv~  130 (700)
T Consensus       174 ~~y~I~el~~~~~~ti~G~V~~~~~irtF~r~DGS~G~v~sl~l~DeTGsIRvTLWdd~ad~---~v~kGD~V~V~Gy~~  250 (649)
T PRK12366        174 DNYKIPELMPNLLKTINGEITKAYPKKEFTKKDGTEGQLKSFIVKDETGSIRVTLWNELTDI---EVKKGDIVEVSGYVK  250 (649)
T ss_pred             CCCCHHHHCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCC---CCCCCCEEEEEEEEC
T ss_conf             77327782778752699999643686353247898646767899778885899985676654---335798999988872


Q ss_pred             E-CCCEEEEECCEEEEC
Q ss_conf             3-187799977868962
Q gi|254780945|r  131 K-LKNRIIMVHPHYIFH  146 (700)
Q Consensus       131 ~-~~~~~qi~hPe~~~~  146 (700)
T Consensus       251 egy~g~lel~~~n~~I~  267 (649)
T PRK12366        251 QGYSGNTELSVDNIGIV  267 (649)
T ss_pred             CCCCCCEEEEECCEEEC
T ss_conf             56324048887537850