HHsearch alignment for GI: 254780945 and conserved domain: PRK12377

>PRK12377 putative replication protein; Provisional.
Probab=94.98  E-value=0.11  Score=32.67  Aligned_cols=62  Identities=15%  Similarity=0.272  Sum_probs=48.9

Q ss_pred             CCHHHHHHHH---HHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHH
Q ss_conf             7988999999---99984100134307886214422369999997334443054588612799999
Q gi|254780945|r  273 PTKSQESAIK---DILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQ  335 (700)
Q Consensus       273 LT~~Q~~ai~---eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~  335 (700)
T Consensus        79 ~~~~~~~a~~~a~~~~~~F~~-~~~NlIf~G~pGtGKTHLA~AIg~~a~~~G~sVlF~t~~dLv~~  143 (248)
T PRK12377         79 QNDGQRYALSQAKSIADELMT-GCTNFVFSGKPGTGKNHLAAAIGNRLLAKGRSVIVVTVPDVMSR  143 (248)
T ss_pred             CCHHHHHHHHHHHHHHHHHHC-CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
T ss_conf             787899999999999998731-88608998999987889999999999987996999889999999