HHsearch alignment for GI: 254780945 and conserved domain: PRK12898
>PRK12898 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.97 E-value=8.8e-08 Score=80.60 Aligned_cols=280 Identities=21% Similarity=0.256 Sum_probs=183.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 14422369999997334443054588612799999999862110145786589962464225667687762134754864
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIII 380 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiI 380 (700)
T Consensus 139 ~TGEGKTL~atlpaylnAL~G~gVHvvTvNDYLA~RDae~mg~iy~fLGLsvg~i~~~~~~~eRr~aY~------~DItY 212 (673)
T PRK12898 139 QTGEGKTLTATLPAGTAALAGRPVHVITVNDYLAERDAEQMRPLYEALGVTVGCVIEDQDPEERRAAYG------ADVTY 212 (673)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHC------CCCEE
T ss_conf 078858999999999997369970898045577787699999999982977845179999799999726------99579
Q ss_pred ECHHHCC-----CCC--------------------------CCCCCCEEEECCCC-------------------CCC---
Q ss_conf 1112013-----345--------------------------54444178852101-------------------335---
Q gi|254780945|r 381 GTHALFQ-----DSI--------------------------QYYKLILVIVDEQH-------------------RFG--- 407 (700)
Q Consensus 381 GTHAL~q-----~~v--------------------------~F~~LgLvViDEQH-------------------RFG--- 407 (700)
T Consensus 213 gTn~E~GFDYLRDnm~~~~~~~~~~~~~~~l~~~~~~~~~~vqR~l~fAIVDEvDSILIDEARTPLIISgp~~~~~~~~~ 292 (673)
T PRK12898 213 CTNKELVFDYLRDRIALGQRAGDARLALESLRGGSERSGQLLLRGLHFAIVDEADSVLIDEARTPLIISAPAKEEDGAAV 292 (673)
T ss_pred ECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCEEEEECHHHEEECCCCCCCCCCCCCCCCCHHHH
T ss_conf 56523324577641302334321111101101334667775135675378733033121024676101477777640899
Q ss_pred HHHHHHHHHC---------------------C------------------------------------------------
Q ss_conf 6889987402---------------------5------------------------------------------------
Q gi|254780945|r 408 VQQRLKLTQK---------------------A------------------------------------------------ 418 (700)
Q Consensus 408 V~QR~~L~~K---------------------g------------------------------------------------ 418 (700)
T Consensus 293 y~~a~~~~~~L~~~~dY~iDek~k~v~LTe~G~~~ie~~l~~~~~~~~~~~~~~~~i~~ALrA~~lf~rDvdYIV~dgeV 372 (673)
T PRK12898 293 LRRALALAAELQEGEDYRIDAATKQIELTEAGRARIAALAESLPPAWRGAVRREELVRQALSALHLFRRDEHYIVRDGKV 372 (673)
T ss_pred HHHHHHHHHHCCCCCCEEEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCE
T ss_conf 99999999856788877986688826578679999999724156556531148999999999999985798389978928
Q ss_pred -------------------------------------------------CCCCCEEECHHHHHHHHHH-HHHHCCCHHHH
Q ss_conf -------------------------------------------------6776101010132278999-97520101111
Q gi|254780945|r 419 -------------------------------------------------TAPHVLLMTATPIPRTLVL-TSLGDIDISKI 448 (700)
Q Consensus 419 -------------------------------------------------~~ph~L~MtATPIPRTLal-~~ygdldvS~i 448 (700)
T Consensus 373 vIVDEfTGR~m~GRrwsdGLHQAIEAKEgV~I~~e~qTlAsIT~QnfFR~Y~kLsGMTGTA~tea~Ef~~iY-~L~Vv~I 451 (673)
T PRK12898 373 VIVDEFTGRVMPDRSWSDGLHQAIEAKEGVELTDPRETLARITFQRFFRRYLRLAGMTGTAREVAGELWSVY-GLPVVRI 451 (673)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHH-CCCEEEC
T ss_conf 998788885068880663789999985399878312356643499999856174057778575799999975-9976986
Q ss_pred -CCCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCC
Q ss_conf -02355766620799970--200268999976310387389997120122111210146666666866371031201469
Q gi|254780945|r 449 -TEKPAGRKPIKTVIIPI--NRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRM 525 (700)
Q Consensus 449 -~e~P~gR~~I~T~~~~~--~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm 525 (700)
T Consensus 452 PTnrP~~R~D~~D~vy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~l---S-----~~L~~~-gi~h~VLNAk~ 522 (673)
T PRK12898 452 PTNRPSQRIVLPTEVFLTLAAKWAAVAARVRELHASGRPVLVGTRSVAASERL---S-----ALLREA-GLPHQVLNAKQ 522 (673)
T ss_pred CCCCCCCCEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH---H-----HHHHHC-CCCHHHCCCCC
T ss_conf 89997301237985856999999999999999986799889983758999999---9-----999986-99756647866
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCC------CCCEEEEECHHHCCHHHH-HHHHHCCCCCCCCEEEEEEECC
Q ss_conf 989999999997559869999800341046888------765899858525474688-7730116678983599997088
Q gi|254780945|r 526 SDIDKESVMDSFKNGTCKLLIATTVIEVGIDVV------DASIIIIENAEHFGLAQL-HQLRGRVGRGEEISSCILLYHP 598 (700)
Q Consensus 526 ~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvp------na~~mvI~~aerfGLsqL-HQLRGRVGRg~~~s~c~l~~~~ 598 (700)
T Consensus 523 ~~~EA~IIA~AG~~G--aVTIATNMAGRGTDI~Lg~~V~~~GGLhVIgTerheSrRIDnQLrGRsGRQGDPGss~f~lSl 600 (673)
T PRK12898 523 DAEEAAIVARAGQRG--RITVATNMAGRGTDIKLEPEVAARGGLHVILTERHESARIDRQLAGRCGRQGDPGSSEAILSL 600 (673)
T ss_pred HHHHHHHHHHCCCCC--CEEEECCCCCCCCCCCCCHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEE
T ss_conf 687999999439999--879702367898684767678862898898437551124565642354468999851489981