HHsearch alignment for GI: 254780945 and conserved domain: PRK12903
>PRK12903 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.18 E-value=4.8e-09 Score=90.55 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=189.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 14422369999997334443054588612799999999862110145786589962464225667687762134754864
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIII 380 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiI 380 (700)
T Consensus 99 ~TGEGKTL~atlp~ylnal~g~gvhvvTvNdYLA~RDae~m~~~y~~lGltvg~~~~~~~~~~r~~aY~------~ditY 172 (885)
T PRK12903 99 KTGEGKTITSIAPVYLNALEGKGVIVSTVNEYLAERDAEEMGKVFKFLGLSVGINKANMDPNLKREAYN------CDITY 172 (885)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHC------CCCEE
T ss_conf 068857999999999987469980898064565585599999999982965601189999799999856------99679
Q ss_pred ECHHHCC-----CCC-------CCCCCCEEEECCCC-------------------CCCHHHHH-----------------
Q ss_conf 1112013-----345-------54444178852101-------------------33568899-----------------
Q gi|254780945|r 381 GTHALFQ-----DSI-------QYYKLILVIVDEQH-------------------RFGVQQRL----------------- 412 (700)
Q Consensus 381 GTHAL~q-----~~v-------~F~~LgLvViDEQH-------------------RFGV~QR~----------------- 412 (700)
T Consensus 173 ~tn~e~gFDyLrDnm~~~~~~~vqr~~~~aIvDEvDSiLIDeArtPLiisg~~~~~~~~y~~~~~~~~~l~~~dy~id~~ 252 (885)
T PRK12903 173 STHSELGFDYLRDNMVSSYEEKVQRGLNFCLIDEVDSILIDEARTPLIISGGKSNESNLYKAADQFVRTLEEDDYKIDEE 252 (885)
T ss_pred ECCCCEEECCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 77865030114001135837725889980366541144330467752576789886469999999865336566886314
Q ss_pred ----HHHHCC----------------------------------------------------------------------
Q ss_conf ----874025----------------------------------------------------------------------
Q gi|254780945|r 413 ----KLTQKA---------------------------------------------------------------------- 418 (700)
Q Consensus 413 ----~L~~Kg---------------------------------------------------------------------- 418 (700)
T Consensus 253 ~~~v~lte~G~~~~e~~~~~~~l~~~~~~~~~~~i~~al~A~~l~~~d~dYiV~d~~v~ivDe~TGR~m~grr~s~GLhQ 332 (885)
T PRK12903 253 SKAIYLTEKGIKKANKFFKLDNLYAIENSELFHRIQNALRAHKVFKEGVEYIVRDGKIELVDQFTGRIMEGRSYSEGLQQ 332 (885)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 47764251158999984266444661157999999999999999856970799779289987898862788803036899
Q ss_pred ---------------------------CCCCCEEECHHHHHHHHH---HHHHHCCCHHHHC-CCCCCCCCCEEEEEEC--
Q ss_conf ---------------------------677610101013227899---9975201011110-2355766620799970--
Q gi|254780945|r 419 ---------------------------TAPHVLLMTATPIPRTLV---LTSLGDIDISKIT-EKPAGRKPIKTVIIPI-- 465 (700)
Q Consensus 419 ---------------------------~~ph~L~MtATPIPRTLa---l~~ygdldvS~i~-e~P~gR~~I~T~~~~~-- 465 (700)
T Consensus 333 aiEaKE~v~i~~e~~t~a~iT~Qn~Fr~y~kl~GmTGTa--~te~~Ef~~iY~-l~v~~iPtn~p~~R~d~~d~vy~t~~ 409 (885)
T PRK12903 333 AIQAKEMVEIEPETKTLATITYQNFFRLFKKLSGMTGTA--KTEEQEFIDIYN-MRVNVVPTNKPVIRKDEPDSIFGTKH 409 (885)
T ss_pred HHHHHCCCCCCCCCCEEEEEEHHHHHHHCCHHCCCCCCC--HHHHHHHHHHHC-CEEEECCCCCCCEEECCCCHHHCCHH
T ss_conf 999872887798873136630998986460422676777--889999999869-73698189998521428323107899
Q ss_pred CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEE
Q ss_conf 20026899997631038738999712012211121014666666686637103120146998999999999755986999
Q gi|254780945|r 466 NRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLL 545 (700)
Q Consensus 466 ~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iL 545 (700)
T Consensus 410 ~k~~av~~ei~~~~~~gqPvLvgt~sve~Se~l---s-----~~L~~~-~i~h~vLNAk~~~~EA~Iia~A--G~~g~VT 478 (885)
T PRK12903 410 AKWKAVVKEVKRVHEKGQPILIGTAQVEDSEQL---H-----EYLLEA-NIPHTVLNAKQHAREAEIIAKA--GQKGAIT 478 (885)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHH---H-----HHHHHC-CCCCEEEECCCHHHHHHHHHHC--CCCCCEE
T ss_conf 999999999999985799889956847999999---9-----999856-8770355468658899999954--8999189
Q ss_pred EECHHHHCCCCC------CCCCEEEEECHHHCCHHHH-HHHHHCCCCCCCCEEEEEEECCC
Q ss_conf 980034104688------8765899858525474688-77301166789835999970888
Q gi|254780945|r 546 IATTVIEVGIDV------VDASIIIIENAEHFGLAQL-HQLRGRVGRGEEISSCILLYHPP 599 (700)
Q Consensus 546 vaTtviEVGvdv------pna~~mvI~~aerfGLsqL-HQLRGRVGRg~~~s~c~l~~~~~ 599 (700)
T Consensus 479 iATNMAGRGTDI~Lg~~v~~~GGL~VigterhesrRiD~QLrGR~gRQGDpG~s~f~~Sle 539 (885)
T PRK12903 479 IATNMAGRGTDIKLSKGVLELGGLYVLGTEKAESRRIDNQLRGRSGRQGDVGESRFFISLD 539 (885)
T ss_pred EECCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCEEEEEECC
T ss_conf 8376678996857416589729858984265620458888607434689997359999726