HHsearch alignment for GI: 254780945 and conserved domain: PRK12906
>PRK12906 secA preprotein translocase subunit SecA; Reviewed.
Probab=99.08 E-value=7.4e-09 Score=89.04 Aligned_cols=280 Identities=20% Similarity=0.248 Sum_probs=183.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 14422369999997334443054588612799999999862110145786589962464225667687762134754864
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIII 380 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiI 380 (700)
T Consensus 101 ~TGEGKTL~atlp~ylnaL~GkgvhvvTvNdYLA~RDae~m~~vy~~lGltvg~i~~~~~~~err~aY~------~DItY 174 (823)
T PRK12906 101 RTGEGKTLTATLPVYLNALEGKGVHVVTVNEYLAKRDATEMGELYRWLGLTVGLNLNDMSPDEKREAYN------CDITY 174 (823)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHC------CCCEE
T ss_conf 068858999999999986469980898054465586799999999980966712089999899999850------78446
Q ss_pred ECHHHCC-----C-------CCCCCCCCEEEECCCCC-------------------------------------------
Q ss_conf 1112013-----3-------45544441788521013-------------------------------------------
Q gi|254780945|r 381 GTHALFQ-----D-------SIQYYKLILVIVDEQHR------------------------------------------- 405 (700)
Q Consensus 381 GTHAL~q-----~-------~v~F~~LgLvViDEQHR------------------------------------------- 405 (700)
T Consensus 175 ~Tn~e~gFDYLRDnm~~~~~~~vqr~~~~aIvDEvDSiLIDEArtPLIISg~~~~~~~~y~~~~~~v~~l~~~~~~~~~~ 254 (823)
T PRK12906 175 STNSELGFDYLRDNMVVYKEQMVQRPLNYAIVDEVDSILIDEARTPLIISGPAEGASDLYIRADRFVKTLTKDEDDDADD 254 (823)
T ss_pred ECCCCEECCCCCCCCCCCHHHHCCCCCCEEEEECHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 25655021113544126888834788855898541465432356762662577555358999999999998634311233
Q ss_pred ------CCHHHHHH---HHHCC----------------------------------------------------------
Q ss_conf ------35688998---74025----------------------------------------------------------
Q gi|254780945|r 406 ------FGVQQRLK---LTQKA---------------------------------------------------------- 418 (700)
Q Consensus 406 ------FGV~QR~~---L~~Kg---------------------------------------------------------- 418 (700)
T Consensus 255 ~~~~~dy~id~~~~~v~lt~~G~~~~e~~~~~~~ly~~~~~~~~~~i~~aL~A~~lf~~d~dYiV~d~~V~ivDe~TGR~ 334 (823)
T PRK12906 255 DEDHGDYKIDEPSKTVSLTEEGIEKAEKLLGLDNLYDPENQALVHHIDQALRANYLMLKDKDYIVQNGEVLIVDEFTGRV 334 (823)
T ss_pred CCCCCCEEEECCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCC
T ss_conf 47777758742546677517799998860488877883110599999999999999857985899889189987888886
Q ss_pred ---------------------------------------CCCCCEEECHHHHHHHHHHHHHHCCCHHHHC-CCCCCCCCC
Q ss_conf ---------------------------------------6776101010132278999975201011110-235576662
Q gi|254780945|r 419 ---------------------------------------TAPHVLLMTATPIPRTLVLTSLGDIDISKIT-EKPAGRKPI 458 (700)
Q Consensus 419 ---------------------------------------~~ph~L~MtATPIPRTLal~~ygdldvS~i~-e~P~gR~~I 458 (700)
T Consensus 335 m~gRr~s~GLHQAiEaKE~v~i~~e~~tlA~IT~QnfFr~Y~kLsGMTGTA~te~~Ef~~iY~l~Vv~IPTn~P~~R~d~ 414 (823)
T PRK12906 335 MEGRRYSDGLHQAIEAKEGVEIQNENQTLATITYQNYFRLYKKLSGMTGTAKTEEEEFREIYNMDVITIPTNRPVIRVDL 414 (823)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHCHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCEEEEC
T ss_conf 89992664679999987288778887303676699998646253167677687899999986886187179998511507
Q ss_pred EEEEEEC--CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
Q ss_conf 0799970--20026899997631038738999712012211121014666666686637103120146998999999999
Q gi|254780945|r 459 KTVIIPI--NRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDS 536 (700)
Q Consensus 459 ~T~~~~~--~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~ 536 (700)
T Consensus 415 ~d~iy~t~~~K~~Ai~~ei~~~~~~gqPvLvGT~SVe~SE~l--------s~~L~~~-gi~h~vLNAk~~--~~EA~IIa 483 (823)
T PRK12906 415 PDLLYPTLDSKFNAVVDDIKERHAKGQPVLVGTVSIESSERL--------SQLLDKA-GIPHAVLNAKNH--AKEAEIIA 483 (823)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHH--------HHHHHHC-CCCHHHHCCCCH--HHHHHHHH
T ss_conf 434647999999999999999986799889971758999999--------9999976-870353068775--78999998
Q ss_pred HHCCCEEEEEECHHHHCCCCCCC-----------------------------------CCEEEEECHHHCCHHHH-HHHH
Q ss_conf 75598699998003410468887-----------------------------------65899858525474688-7730
Q gi|254780945|r 537 FKNGTCKLLIATTVIEVGIDVVD-----------------------------------ASIIIIENAEHFGLAQL-HQLR 580 (700)
Q Consensus 537 F~~g~~~iLvaTtviEVGvdvpn-----------------------------------a~~mvI~~aerfGLsqL-HQLR 580 (700)
T Consensus 484 ~AG~~GaVTIATNMAGRGTDI~LGg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIgTErheSrRIDnQLr 563 (823)
T PRK12906 484 QAGQRGAVTIATNMAGRGTDIKLGGNPFEDIEAYQEAWIRELPKMKQRCEERRDKVRELGGLAVIGTERHESRRIDNQLR 563 (823)
T ss_pred HCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
T ss_conf 34899938970655689879630897302134332224667888888776556899973893798504440256787872
Q ss_pred HCCCCCCCCEEEEEEEC
Q ss_conf 11667898359999708
Q gi|254780945|r 581 GRVGRGEEISSCILLYH 597 (700)
Q Consensus 581 GRVGRg~~~s~c~l~~~ 597 (700)
T Consensus 564 GRaGRQGDPGss~F~lS 580 (823)
T PRK12906 564 GRSGRQGDPGSTRFYLS 580 (823)
T ss_pred CCCCCCCCCCCCEEEEE
T ss_conf 32134799985237653