HHsearch alignment for GI: 254780945 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=99.86 E-value=4.2e-18 Score=161.57 Aligned_cols=312 Identities=21% Similarity=0.283 Sum_probs=227.1
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH---------HHHCCEEEEEHHHHHHH
Q ss_conf 986302467988999999999841001343078862144223699999973344---------43054588612799999
Q gi|254780945|r 265 ILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV---------EAGGQAVIMAPIGILAQ 335 (700)
Q Consensus 265 f~~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~---------~~G~Q~alMaPTEILA~ 335 (700)
T Consensus 26 f~~~~-~~p~~~Q~~a~~~i~~G----~--~~Li~ApTGsGKTlAaflp~l~~l~~~~~~~~~~~~~~~LyIsPLkAL~~ 98 (878)
T PRK13767 26 FKRKF-GTFTPPQRYAIPLIHEG----K--NVLISSPTGSGKTLAAFLGIIDELFRLAEEGELEDSVYCIYVSPLRALNN 98 (878)
T ss_pred HHHCC-CCCCHHHHHHHHHHHCC----C--CEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH
T ss_conf 98537-99998999999999679----9--88998999813999999999999985000367788728999684798899
Q ss_pred HHHHHHHHHCCC------------CCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC----HHHCCC---CCCCCCCC
Q ss_conf 999862110145------------78658996246422566768776213475486411----120133---45544441
Q gi|254780945|r 336 QHYEFIKKYTQN------------TQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT----HALFQD---SIQYYKLI 396 (700)
Q Consensus 336 QH~~~~~~~~~~------------~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGT----HAL~q~---~v~F~~Lg 396 (700)
T Consensus 99 D~~r~L~~pl~~i~~~~~~~g~~~~~i~v~vr~GDT~~~er~r~~~----~pp~ILiTTPEsL~lll~~~~~~~~l~~l~ 174 (878)
T PRK13767 99 DIHRNLEEPLEEIREIAKERGIELPEIRHAVRTGDTSSYEKQKMLR----KPPHILITTPETLAILLNSPKFREKLRTVK 174 (878)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH----CCCCEEECCHHHHHHHHCCHHHHHHHCCCC
T ss_conf 9999888699999999875278877744776369999999999974----899879879899999954967999855899
Q ss_pred EEEECCCCC-----CCHHHHHHHHHC----CCCCCCEEECHHHH-HHHHHHHHHH------CCCHHHHCCCCCCCCCCEE
Q ss_conf 788521013-----356889987402----56776101010132-2789999752------0101111023557666207
Q gi|254780945|r 397 LVIVDEQHR-----FGVQQRLKLTQK----ATAPHVLLMTATPI-PRTLVLTSLG------DIDISKITEKPAGRKPIKT 460 (700)
Q Consensus 397 LvViDEQHR-----FGV~QR~~L~~K----g~~ph~L~MtATPI-PRTLal~~yg------dldvS~i~e~P~gR~~I~T 460 (700)
T Consensus 175 ~VIvDE~H~l~~~kRG~~l~l~L~RL~~~~~~~~~riglSATv~~~~~~a~~L~g~~~~g~~r~~~iv~~~~--~k~~~~ 252 (878)
T PRK13767 175 WVIVDEIHSLAENKRGVHLSLSLERLEELVGGEFVRIGLSATIEPLEEVAKFLVGYNDDGEPRDCEIVDTRF--AKPIDI 252 (878)
T ss_pred EEEECCCHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEECCCC--CCCCEE
T ss_conf 999817167524774589999999999866899879999646489999999851556679998528954687--787426
Q ss_pred EEEEC-C-----C----HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC-----CEECCCCCC
Q ss_conf 99970-2-----0----0268999976310387389997120122111210146666666866371-----031201469
Q gi|254780945|r 461 VIIPI-N-----R----IDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTS-----SIAIIHGRM 525 (700)
Q Consensus 461 ~~~~~-~-----~----~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~-----~v~~lHGkm 525 (700)
T Consensus 253 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~i~~~~~tLvF~N--------tR~~aE~~~~~L~~~~~~~~~~~~i~~HHgSl 324 (878)
T PRK13767 253 KVLCPVDDLIHTPAEEISEALYETLDELIQEHRTTLIFTN--------TRSGAERVVYKLRKRYPEEYDEDNIGAHHSSL 324 (878)
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC--------CHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 8844562124588556899999999999983897799915--------58999999999998534306754322201778
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCC-CCCEEEEEEECC
Q ss_conf 9899999999975598699998003410468887658998585254746887730116678-983599997088
Q gi|254780945|r 526 SDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRG-EEISSCILLYHP 598 (700)
Q Consensus 526 ~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg-~~~s~c~l~~~~ 598 (700)
T Consensus 325 s~e~R~~vE~~lk~G~l~~vV~TsSLELGIDiG~Vd~Viq~gsP~-svarllQR~GRsGH~~g~~s~g~~vp~~ 397 (878)
T PRK13767 325 SREVRLEVEEKLKRGELKVVVSSTSLELGIDIGYIDLVVLLGSPK-SVSRLLQRIGRAGHRLGEVSKGRIIVVD 397 (878)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCEEEECCCCH-HHHHHHHHHCCCCCCCCCEEEEEEEECC
T ss_conf 999999999998579986899827365077777525899758961-1899999833578999980469999798